Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr2P08110_001 | |
| GSMUA_Achr3P24060_001 | plasma membrane |
| GSMUA_Achr6P25560_001 | |
| GSMUA_Achr7P17130_001 | |
| GSMUA_Achr8P06600_001 | plasma membrane |
| GSMUA_Achr9P08680_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051026_P001 | Maize | cytosol | 7.85 | 75.65 |
| OQU81566 | Sorghum | nucleus | 65.97 | 66.58 |
| Os04t0421900-01 | Rice | plasma membrane | 66.06 | 66.48 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 64.08 | 66.42 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 59.66 | 66.17 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 63.9 | 66.04 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 63.9 | 65.8 |
| Zm00001d025398_P005 | Maize | nucleus | 66.16 | 64.87 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 57.04 | 64.62 |
| Zm00001d003713_P006 | Maize | nucleus | 63.27 | 61.55 |
| KRH34989 | Soybean | endoplasmic reticulum | 59.48 | 60.63 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 26.08 | 59.96 |
| KRG91797 | Soybean | cytosol | 58.66 | 59.69 |
| Solyc12g056520.1.1 | Tomato | cytosol | 52.26 | 59.26 |
| CDY13565 | Canola | nucleus | 55.23 | 58.01 |
| CDX68084 | Canola | nucleus | 56.32 | 57.78 |
| CDX85974 | Canola | nucleus | 56.41 | 57.76 |
| Bra003706.1-P | Field mustard | nucleus | 56.41 | 57.76 |
| AT1G76850.1 | Thale cress | nucleus | 56.41 | 57.34 |
| Solyc04g071350.2.1 | Tomato | nucleus | 57.22 | 57.32 |
| PGSC0003DMT400061943 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 11.1 | 57.21 |
| AT1G21170.2 | Thale cress | nucleus | 56.68 | 57.14 |
| VIT_18s0072g00740.t01 | Wine grape | nucleus | 6.41 | 49.31 |
| CDY45950 | Canola | cytosol | 12.82 | 40.34 |
| PGSC0003DMT400027989 | Potato | nucleus | 7.49 | 40.1 |
| Bra008282.1-P | Field mustard | cytosol | 41.25 | 39.84 |
| CDY45951 | Canola | extracellular | 5.23 | 36.48 |
| CDY04603 | Canola | cytosol | 2.26 | 25.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P25360_001 | EnsemblPlants:GSMUA_Achr6T25360_001 | EnsemblPlantsGene:GSMUA_Achr6G25360_001 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006893 | GO:GO:0008150 | InterPro:EXOC2/Sec5 |
| PANTHER:PTHR13043 | PFAM:PF15469 | SEG:seg | UniParc:UPI000295ECC6 | UniProt:M0TA32 | MapMan:22.6.3.3 |
Description
Exocyst complex component 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25360_001]
Coordinates
chr6:+:26427021..26455689
Molecular Weight (calculated)
125027.0 Da
IEP (calculated)
6.103
GRAVY (calculated)
-0.532
Length
1108 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASDSDIDED ELLQIALKEQ AQREVNYKRP SAKASKPVVN LIQPPPPPHF MAQDQHQQRN PNPRANPVPG KQPPQQHQRK ASRGGGVDDD DDSDVEMLSI
0101: SSGDEDSSKD RAAPQRGRSG EHRASRDDLD LGTDDDEPSS WKRVDEAELA RRVREMRETR AAPGAQGLEQ KTAPMARKGL ANLQSLPRGV EVLDPLGLGV
0201: IDNKSLRLIT DASVSSPVSR ERSGTLDPTV REKVIYSSPH FDPKIFLSRV HQETSAADLE SGALTLKNDL KGRTQQKKQL VKENFDCFVS CKTTIDDIQS
0301: KLRQIEDDPE GAGTARLYEA TQNISQVANH AFQPLFERQV QAEKIRSVQG MLQRFRTLFN LPSSIRGSIA KGEYDLAVRE YRKAKSIVLP SHVGILKRVL
0401: EEVEKVMHEF RGMLYKSMED PELDLADLEN IVRLLLELEP SSDPVWRYLN IQNRRIRSLL EKCTLNHEGQ MEILHNEIRE KVKSDARWRQ LQEDSNKLLD
0501: TESPLDDSPE VDMHPDVEEV DALRGRYIHM LNSVLIHHIP AFWRLSLSVF SGKFAKVTTG GVLLDSETNA KPALSKNEEK VGEIKYSTHT LEEVAAMIQG
0601: TITAFEAKVQ STFRDFDESN ILRPYMSDAI KEIAKACQTL ESKESAPSSA VEALHALYFE ITKIYILRLC SWMRATTKEI SKDETWTPLT TLERNRSPYA
0701: ISYLPLAFQA MTISAMDQID IMVQSLRNET TKYQYVFEHI QEIQESVRLA FLNSFLDFAG CLERIGTELS QKRSSKKNSH LQNGYLHSLE KDSSILYGGR
0801: AAASDFHKKL LIVLSNIGYC KDELSHGLYS RYKHIWLQYR DKDEQKADMR DLVTSFSALE EKVLGQYTCA KSDLIRDAAQ IYLLNSGIQW GGAPSVKGIR
0901: DATIDLLHIL VGVHAEVFFG AKPLLEKILG ILVEGLIDTF ISLFDEHKNK DLKVLDTNGF CQLMLELEYF ETVLNTYFSP QAHEALKRLQ GLLLEKACES
1001: ATEPSENPGH QRRSTRGSED AMVEDRQSTV SPDDLLVLAQ QYSSEILESE LERTRLNIVC FMESSLQPAS FTGPPKPAFA SHQGSVASPS YRRQQTVGSP
1101: AYSRQRRK
0101: SSGDEDSSKD RAAPQRGRSG EHRASRDDLD LGTDDDEPSS WKRVDEAELA RRVREMRETR AAPGAQGLEQ KTAPMARKGL ANLQSLPRGV EVLDPLGLGV
0201: IDNKSLRLIT DASVSSPVSR ERSGTLDPTV REKVIYSSPH FDPKIFLSRV HQETSAADLE SGALTLKNDL KGRTQQKKQL VKENFDCFVS CKTTIDDIQS
0301: KLRQIEDDPE GAGTARLYEA TQNISQVANH AFQPLFERQV QAEKIRSVQG MLQRFRTLFN LPSSIRGSIA KGEYDLAVRE YRKAKSIVLP SHVGILKRVL
0401: EEVEKVMHEF RGMLYKSMED PELDLADLEN IVRLLLELEP SSDPVWRYLN IQNRRIRSLL EKCTLNHEGQ MEILHNEIRE KVKSDARWRQ LQEDSNKLLD
0501: TESPLDDSPE VDMHPDVEEV DALRGRYIHM LNSVLIHHIP AFWRLSLSVF SGKFAKVTTG GVLLDSETNA KPALSKNEEK VGEIKYSTHT LEEVAAMIQG
0601: TITAFEAKVQ STFRDFDESN ILRPYMSDAI KEIAKACQTL ESKESAPSSA VEALHALYFE ITKIYILRLC SWMRATTKEI SKDETWTPLT TLERNRSPYA
0701: ISYLPLAFQA MTISAMDQID IMVQSLRNET TKYQYVFEHI QEIQESVRLA FLNSFLDFAG CLERIGTELS QKRSSKKNSH LQNGYLHSLE KDSSILYGGR
0801: AAASDFHKKL LIVLSNIGYC KDELSHGLYS RYKHIWLQYR DKDEQKADMR DLVTSFSALE EKVLGQYTCA KSDLIRDAAQ IYLLNSGIQW GGAPSVKGIR
0901: DATIDLLHIL VGVHAEVFFG AKPLLEKILG ILVEGLIDTF ISLFDEHKNK DLKVLDTNGF CQLMLELEYF ETVLNTYFSP QAHEALKRLQ GLLLEKACES
1001: ATEPSENPGH QRRSTRGSED AMVEDRQSTV SPDDLLVLAQ QYSSEILESE LERTRLNIVC FMESSLQPAS FTGPPKPAFA SHQGSVASPS YRRQQTVGSP
1101: AYSRQRRK
0001: MSSSDDLDED ELLQMALKEQ SQRDVTYQKP PSANSRKPVT NLVQQPRRQK RAAAPPSKGG AKASRKPSMD EDDESEVELL SISSGDEDEG NDRGRGGGGD
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
Arabidopsis Description
SEC5BExocyst complex component SEC5 [Source:TAIR;Acc:AT1G21170]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.