Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051026_P001 | Maize | cytosol | 9.74 | 93.04 |
| Zm00001d025398_P005 | Maize | nucleus | 93.53 | 90.89 |
| Zm00001d003713_P006 | Maize | nucleus | 90.53 | 87.27 |
| Os04t0421900-01 | Rice | plasma membrane | 84.79 | 84.56 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 81.69 | 83.68 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 81.42 | 83.63 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 81.6 | 83.27 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 74.32 | 81.68 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 66.58 | 65.97 |
| VIT_18s0072g00720.t01 | Wine grape | cytosol, plastid | 55.01 | 61.76 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 26.23 | 59.75 |
| KRH34989 | Soybean | endoplasmic reticulum | 56.83 | 57.41 |
| Solyc12g056520.1.1 | Tomato | cytosol | 50.82 | 57.11 |
| KRG91797 | Soybean | cytosol | 56.19 | 56.66 |
| CDY13565 | Canola | nucleus | 54.1 | 56.3 |
| CDX85974 | Canola | nucleus | 55.46 | 56.28 |
| CDX68084 | Canola | nucleus | 55.19 | 56.11 |
| Bra003706.1-P | Field mustard | nucleus | 55.28 | 56.1 |
| AT1G76850.1 | Thale cress | nucleus | 55.37 | 55.78 |
| Solyc04g071350.2.1 | Tomato | nucleus | 55.92 | 55.52 |
| AT1G21170.2 | Thale cress | nucleus | 55.01 | 54.96 |
| PGSC0003DMT400061943 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.11 | 51.63 |
| VIT_18s0072g00740.t01 | Wine grape | nucleus | 5.37 | 40.97 |
| PGSC0003DMT400027989 | Potato | nucleus | 7.38 | 39.13 |
| Bra008282.1-P | Field mustard | cytosol | 40.53 | 38.8 |
| CDY45950 | Canola | cytosol | 12.11 | 37.78 |
| CDY45951 | Canola | extracellular | 5.46 | 37.74 |
| CDY04603 | Canola | cytosol | 2.0 | 22.0 |
Protein Annotations
| MapMan:22.6.3.3 | EntrezGene:8077587 | UniProt:C5YGD2 | InterPro:Cullin_repeat-like_dom_sf | ProteinID:EES10795.1 | InterPro:EXOC2/Sec5 |
| GO:GO:0000145 | GO:GO:0001927 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006893 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlants:OQU81566 |
| ProteinID:OQU81566 | ProteinID:OQU81566.1 | PFAM:PF15469 | PANTHER:PTHR13043 | EnsemblPlantsGene:SORBI_3006G077300 | SUPFAM:SSF74788 |
| unigene:Sbi.7137 | UniParc:UPI0001A86FAE | RefSeq:XP_002446467.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:44348161..44359102
Molecular Weight (calculated)
122767.0 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.514
Length
1098 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASDSDVDED ELLQMALQEQ AARDLSHQRP PAANKPVVNL VRPPAPNARG GKGAAAKARQ PSRGGDEDDD SEVELLSISS GDEDDNPRAR GPPPPRGGGG
0101: GRAGARRAAS RDDGDFDDEE PRSWKRVDEA ELARRVREMR EAKVAPNIQE LDQKAAAAAA AARKALTTVQ TLPKGVEVLD PLGLGVMDNK SLRLITDASV
0201: SSPVSREKSQ GLDPSMRDKV IYSSPNFDPK VFLSWVHKDT SAADLEAGAL TLKTDLKGRT QQKKQLVKEN FDCFVSCKTT IDDIESKLRQ IEEDPEGAGT
0301: AHLYSVTQKI SGVANRAFEP LFERQAQAEK IRSVQGMLQR FRTLFNLPSA IRGNIRKGEY DLAVREYQKA KSIVLPSHVG ILKRVLEEVE KVMQEFRGML
0401: YKSMEDPHLD LAELENIVRL LLELEPETDP VWHYLNIQNS RIHGLFEKCT QDHESRMEVL QNKIHEKVLS DSKWRQLQQD SNKSLEVDSA IGDSPRADQL
0501: STNFMAEEAD SLRATYIRRL TSVLIQHVPA FWRLALSVFS GKFAKAASGN VVSDSDMNAK PAANKNDDKS GEVKYTNHTL DEVASMVRAT ISAFDTKVQS
0601: TFRDFEECNI LCPYMSDTIK EIAKACQTLE GKDSSPTAVK MLRTLHFEMT KLYILRLCSW MRATTKKISK DETWVTLSTL ERNKSPYAIS CMPLEFRDIT
0701: ISAMDRIDTM ILNLMSETAK SYDISQPLQE INESVRLAFL NSFLDFAGYL ERFVGELTEN RPNKENNYVQ NGYINGTRET PANTDGDLHK KLLVVLSNIG
0801: YCKAELSEEL YTKYRHIWSP VRNNDERSSD MRDLMTSFSA LEEKVLDQYT FAKSNLIRSA AQSYLLDSGI YWGAAPMVKG IRDATLDLLH ILVAVHAEVY
0901: SGARPLLEKT MKILVEGLVD IFLSVFHENK TKDIRLLDAN GFCQLMLELE YFETVLQTYF SPEAQQAMKS LQENLLEKAC ESVAEAMENP GHQRRPTRGS
1001: EDTASDGQPS VSPDDLLVLA QQYSSDLLQG ELERTRLNIA CFMESTLQST GAPAGSKPGA YSSYQAQVPQ HAPVQTSSPS FRRQQTGTSS PVVSRRRR
0101: GRAGARRAAS RDDGDFDDEE PRSWKRVDEA ELARRVREMR EAKVAPNIQE LDQKAAAAAA AARKALTTVQ TLPKGVEVLD PLGLGVMDNK SLRLITDASV
0201: SSPVSREKSQ GLDPSMRDKV IYSSPNFDPK VFLSWVHKDT SAADLEAGAL TLKTDLKGRT QQKKQLVKEN FDCFVSCKTT IDDIESKLRQ IEEDPEGAGT
0301: AHLYSVTQKI SGVANRAFEP LFERQAQAEK IRSVQGMLQR FRTLFNLPSA IRGNIRKGEY DLAVREYQKA KSIVLPSHVG ILKRVLEEVE KVMQEFRGML
0401: YKSMEDPHLD LAELENIVRL LLELEPETDP VWHYLNIQNS RIHGLFEKCT QDHESRMEVL QNKIHEKVLS DSKWRQLQQD SNKSLEVDSA IGDSPRADQL
0501: STNFMAEEAD SLRATYIRRL TSVLIQHVPA FWRLALSVFS GKFAKAASGN VVSDSDMNAK PAANKNDDKS GEVKYTNHTL DEVASMVRAT ISAFDTKVQS
0601: TFRDFEECNI LCPYMSDTIK EIAKACQTLE GKDSSPTAVK MLRTLHFEMT KLYILRLCSW MRATTKKISK DETWVTLSTL ERNKSPYAIS CMPLEFRDIT
0701: ISAMDRIDTM ILNLMSETAK SYDISQPLQE INESVRLAFL NSFLDFAGYL ERFVGELTEN RPNKENNYVQ NGYINGTRET PANTDGDLHK KLLVVLSNIG
0801: YCKAELSEEL YTKYRHIWSP VRNNDERSSD MRDLMTSFSA LEEKVLDQYT FAKSNLIRSA AQSYLLDSGI YWGAAPMVKG IRDATLDLLH ILVAVHAEVY
0901: SGARPLLEKT MKILVEGLVD IFLSVFHENK TKDIRLLDAN GFCQLMLELE YFETVLQTYF SPEAQQAMKS LQENLLEKAC ESVAEAMENP GHQRRPTRGS
1001: EDTASDGQPS VSPDDLLVLA QQYSSDLLQG ELERTRLNIA CFMESTLQST GAPAGSKPGA YSSYQAQVPQ HAPVQTSSPS FRRQQTGTSS PVVSRRRR
0001: MSSDSNDLDE DELLQMALKE QAKRDLTYQK PPSSSARKPV ANLVQQPRQQ KPVAAAAAPP KKSAAAVRKP SMDEDEESEV ELLSISSGDD DLEREREIGG
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
0101: SSGGAGRGRG SDVREKGRAR KEDDGAWDGG EPDCWKRVNE AELARRVRDM RESRTAPVVQ KVEGKAPAPG KKVALTSLQS LPRGMECIDP LKLGIIDNKT
0201: LRLITESSGS PSKAEKVDNT LREKLVYFSD HFDPKLFLSR IHQDTTAADL EAGALGLKSD LKGRNLQRKQ LVKDNFDCFV SCKTTIDDIE SKLKRIEEDP
0301: EGSGTTHLFN CMKSVTSRAN LAFEPLFERQ AQAEKIRSVQ GMLQRFRTLF NLPSIIRSSI SKGEYDLAVR EYKKAKSIAL PSHVNILKRV LEEVEKVMLE
0401: FKGTLYKSME DPKIDFTSLE NTVRLLLELE PESDPVWHYL NVQNHRIHGL LEKCTYDHEA RVEILRNDTH EKAISDAKWQ QIQQNGVSYS DTASSNENNA
0501: VQVDLQSVEF PSEEIDILKG RYIKRLTAVL VHHIPVFWKT AISIFSGKFA KSSQVTDTSA NKAEEKVTEA RYSTHSLEEV AGMIRKTISV YEAKVNSTFC
0601: DFDESCILRP FMSDAINEVS KACQAFEAKE STPHSAVVAL RKIQAEITKI YIQRLCSWMR ASTEGISKEE TWIPVSILER NRSPYAISYL PLAFRSVIVS
0701: GMEQVNLMIL SVKSEAAKSE DMFAQIEEII ISVRLAFLNC FLDFAAHLEQ IGADLSQSTS RQDNWKNGYS DEHQEEPSAN TYGSVIDPHR RLLMVLSNIG
0801: YCKDELASEL YNKFKYTWLQ SRDKNEDSSD LQDLIMSFSG LGEKVLEHYT FAKANLIRTA ATNYLLDSGI QWGSAPQVKG IRDAAVELLH TLVAVHAEVF
0901: AGAKPLLDKI LGVLIEGLID TFLSVVEENR SSDLRSIDAN GFCQLMFELE YFETVLYSYF TSAATESLKS LQGTVLEIAI ESISEAVETP GHNRRPTRGS
1001: EDTVSDDKQS VSADDLLALT KQCSNELLQQ ELERTRVNTA CFAESAPLES TPPLPKATYS SFRGSMDSPS RNYRGSQSSG SPINARPRRR
Arabidopsis Description
SEC5AExocyst complex component SEC5A [Source:UniProtKB/Swiss-Prot;Acc:Q8S3U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.