Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45951 | Canola | extracellular | 34.0 | 21.38 |
| PGSC0003DMT400061943 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.0 | 20.47 |
| CDY13565 | Canola | nucleus | 39.0 | 3.7 |
| CDX85974 | Canola | nucleus | 39.0 | 3.6 |
| CDX68084 | Canola | nucleus | 38.0 | 3.52 |
| Os04t0421900-01 | Rice | plasma membrane | 27.0 | 2.45 |
| GSMUA_Achr6P25360_001 | Banana | cytosol | 25.0 | 2.26 |
| TraesCS2D01G298000.2 | Wheat | nucleus | 24.0 | 2.24 |
| TraesCS2A01G300100.3 | Wheat | nucleus | 24.0 | 2.23 |
| TraesCS2B01G316400.1 | Wheat | nucleus | 23.0 | 2.15 |
| HORVU2Hr1G074320.5 | Barley | cytosol, plastid | 21.0 | 2.1 |
| OQU81566 | Sorghum | nucleus | 22.0 | 2.0 |
| CDY45948 | Canola | cytosol, nucleus, peroxisome | 4.0 | 0.83 |
| CDY45950 | Canola | cytosol | 0.0 | 0.0 |
| Zm00001d027566_P001 | Maize | cytosol, mitochondrion, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY04603 | EnsemblPlantsGene:GSBRNA2T00119159001 | ProteinID:CDY04603 | ProteinID:CDY04603.1 | UniParc:UPI0004EDF69A | MapMan:35.1 |
Description
BnaC05g16410D
Coordinates
chrLK031956:+:226395..226839
Molecular Weight (calculated)
11432.6 Da
IEP (calculated)
5.568
GRAVY (calculated)
-0.280
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MLICFHQLIT QLEFRDYTKT IFDGRCHRVS QVCTRSWHQW KPTCGGVDAI LNDKQSSVSP DDLLALTQQC SNELLQLELE KTRLNSACFV ETSPLDSISQ
0001: MSSSDDLDED ELLQMALKEQ SQRDVTYQKP PSANSRKPVT NLVQQPRRQK RAAAPPSKGG AKASRKPSMD EDDESEVELL SISSGDEDEG NDRGRGGGGD
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
0101: GGGGRGRGGS GKERGRARKE DDRAWDGVEP DCWKRVNEAE LARKVRDMRE SRTAPSVTQN LDRKVSGADK KVVLTSLQSF PRGMECIDPL KLGIIDNKTL
0201: RLITESSESL SKAEKVDNAL REKLVYTSDH FDPKLFISRI HQETSAADLE SGALALKSDL KGRNLQRKQL VKDNFDCFVS CKTTIDDIES KLKRIEDDPD
0301: GSGTTHLFNC MKSVTSRANR AFEPLFERQA QAEKIRSVQG MLQRFRTLFN LPSIIRSSIS KGEYDLAVRE YKKAKSIALP SHVNLLKRVL EEVEKVMQEF
0401: KGTLYRSMED PKIDFTSLEN TVRLLLELEP ESDPVWHYLN VQNHRIHGML EKCTFDHEAR MEILRNQVHE RALSDAKWRQ IQQNGVQLSD DTSSMEDNQV
0501: QVDQPLEESA RREKDALRGR YIKILTAVIV YHLPTFWKTA LSVFTGKFAK SSQVNDTSAS KAEEKAEEAR YSSHSLEEIA GMIRNTISVY EAKVQSTFHD
0601: FDESYILHPY MSDTIKEVSK ACQAFEAKES APHSAVMALR KVKVEITKIY IQRLCSWMRA STEEISKEET WIPVSILERN RSPYSISYLP LAFRSIIVSG
0701: MEQINMMILS LKGEAARSED MFAHIEEILI SVRLAFLNCF LDFAAHLEQI GADLSQRTTK RESWQNGYSN DHQEEQSINA PESVVDPHRQ LLMILSNIGY
0801: CKDELASELY NKYKYTWLQS RRNDEDISDL QDLMMSFSGL GEKVLEHYTF AKANLIRTAA TNYLLDSGIQ WGAAPPVKGI RDAAVELLHT LVAVHAEVFA
0901: GAKPLLDKIL GTLVEGLIDT FLSLLDENRS DDLSSIDANG FCQLMLELEY FETILKPYLT VDATESLKSL QGAVLEKAIE SISETVENNP GGHQRKPTRG
1001: SEDAISDDKQ SSVSPDDLLA LAQQCTSGML QLELEKTRLN SACFIETIPL DPVPPVAKAA YSRTSTDSPS RNYRESQPMG SPVQARPRRR
Arabidopsis Description
SEC5BExocyst complex component SEC5 [Source:TAIR;Acc:AT1G21170]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.