Factsheet for Zm00001d027566_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

mitochondrion 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051026_P001	Maize	cytosol	18.22	37.39
Zm00001d036062_P001	Maize	cytosol	16.53	22.41
Zm00001d043124_P001	Maize	golgi	25.0	16.62
Zm00001d053086_P001	Maize	cytosol, plastid	28.39	14.82
Zm00001d039959_P001	Maize	cytosol	9.75	13.61
Zm00001d039289_P001	Maize	cytosol, golgi, mitochondrion, plastid	2.12	10.87
Zm00001d003713_P006	Maize	nucleus	33.05	6.85
Zm00001d025398_P005	Maize	nucleus	32.63	6.81
CDY04603	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.246.90	MapMan:17.4.1.1.1	Gene3D:3.30.780.10	UniProt:A0A1D6JN18	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950
InterPro:IPR002687	InterPro:Nop_dom	InterPro:Nop_dom_sf	ProteinID:ONL93436.1	PFAM:PF01253	PFAM:PF01798
PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF35	SUPFAM:SSF55159	SUPFAM:SSF89124	InterPro:SUI1
InterPro:SUI1_dom_sf	UniParc:UPI000843CDB4	EnsemblPlantsGene:Zm00001d027566	EnsemblPlants:Zm00001d027566_P001	EnsemblPlants:Zm00001d027566_T001	:

Description

Exocyst complex component SEC5A

Coordinates

chr1:+:8229144..8232742

Molecular Weight (calculated)

26397.0 Da

IEP (calculated)

9.938

GRAVY (calculated)

-0.390

Length

236 amino acids

Sequence
(BLAST)

001: MSALKTKHST PKYGLVYLAS LIGKASQKHK GKISLSLATK TALAIYYDGE DNSITTECQI KVENLGNQLV QQKGKPKIEV YEKDRKKGVG ALTTHARDSS
101: DIIAIVLVYC MANNNIIRFH PTRRNINGLL RRKSLTTVQG LNKEFSYNKN LIDLKKEFCC NGTEVQDLEL GLVIQLQNIE SKLRQIEEDP EGAGTAHLYS
201: VTLKISGVAN RAFEPLFERQ AQAEKIKSVQ GMLQRF

Best Arabidopsis Sequence Match ( AT3G05060.1 )
(BLAST)

001: MVLVLYETAA GFALFKVKDE GKMANVEDLC KEFDTPDSAR KMVKLKAFEK FDNTSEALEA VAKLLEGAPS KGLRKFLKAN CQGETLAVAD SKLGNVIKEK
101: LKIDCIHNNA VMELLRGVRS QFTELISGLG DQDLAPMSLG LSHSLARYKL KFSSDKVDTM IIQAIGLLDD LDKELNTYAM RVREWYGWHF PELAKIISDN
201: ILYAKSVKLM GNRVNAAKLD FSEILADEIE ADLKDAAVIS MGTEVSDLDL LHIRELCDQV LSLSEYRAQL YDYLKSRMNT IAPNLTALVG ELVGARLISH
301: GGSLLNLSKQ PGSTVQILGA EKALFRALKT KHATPKYGLI FHASLVGQAA PKHKGKISRS LAAKTVLAIR VDALGDSQDN TMGLENRAKL EARLRNLEGK
401: DLGRLSGSSK GKPKIEVYNK DKKMGSGGLI TPAKTYNTAA DSLLGETSAK SEEPSKKKDK KKKKKVEEEK PEEEEPSEKK KKKKAEAETE AVVEVAKEEK
501: KKNKKKRKHE EEETTETPAK KKDKKEKKKK SKD

Arabidopsis Description

NOP5-2Probable nucleolar protein 5-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.