Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P08680_001 | Banana | cytosol | 86.9 | 88.56 |
| GSMUA_Achr2P08110_001 | Banana | cytosol, plastid | 87.32 | 84.85 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 83.58 | 79.76 |
| VIT_18s0072g01030.t01 | Wine grape | cytosol, mitochondrion | 76.51 | 75.26 |
| TraesCS4B01G109800.2 | Wheat | plastid | 79.21 | 74.27 |
| Os11t0171500-01 | Rice | plasma membrane | 79.21 | 74.27 |
| VIT_07s0130g00130.t01 | Wine grape | cytosol | 76.72 | 74.25 |
| TraesCS4A01G206200.2 | Wheat | golgi | 79.0 | 74.07 |
| HORVU4Hr1G019530.1 | Barley | plastid | 79.42 | 74.03 |
| Solyc04g049160.2.1 | Tomato | cytosol | 77.96 | 73.82 |
| TraesCS4D01G107200.1 | Wheat | plastid | 78.79 | 73.74 |
| Zm00001d053016_P002 | Maize | cytosol, plastid | 77.75 | 73.62 |
| KRH63919 | Soybean | cytosol | 75.88 | 73.59 |
| KRH54032 | Soybean | cytosol | 75.88 | 73.44 |
| Solyc05g056570.2.1 | Tomato | cytosol | 76.72 | 73.36 |
| PGSC0003DMT400060262 | Potato | cytosol | 76.72 | 73.36 |
| Zm00001d004812_P002 | Maize | plastid | 77.75 | 73.33 |
| KRG91803 | Soybean | mitochondrion | 74.64 | 73.27 |
| EES09373 | Sorghum | cytosol, plastid | 78.38 | 73.2 |
| KRH34984 | Soybean | cytosol | 74.64 | 72.97 |
| EES16732 | Sorghum | cytosol | 77.75 | 72.62 |
| AT1G35670.1 | Thale cress | cytosol | 74.64 | 72.53 |
| CDY37101 | Canola | cytosol | 74.64 | 72.23 |
| Bra034407.1-P | Field mustard | cytosol | 74.64 | 72.23 |
| CDX73342 | Canola | nucleus, plasma membrane | 74.43 | 72.03 |
| CDY05064 | Canola | cytosol | 74.84 | 72.0 |
| CDX90725 | Canola | cytosol | 74.84 | 72.0 |
| Os12t0169800-00 | Rice | plasma membrane | 78.59 | 71.86 |
| AT4G09570.1 | Thale cress | cytosol | 74.64 | 71.66 |
| KRH41022 | Soybean | plastid | 75.68 | 71.65 |
| KRH59698 | Soybean | plastid | 75.47 | 71.6 |
| HORVU5Hr1G032550.3 | Barley | cytosol | 77.34 | 71.54 |
| CDX80376 | Canola | cytosol | 72.77 | 71.28 |
| CDY46963 | Canola | cytosol | 62.79 | 70.89 |
| AT5G23580.1 | Thale cress | cytosol, mitochondrion | 72.14 | 70.82 |
| CDY16860 | Canola | cytosol | 71.31 | 70.58 |
| CDX87164 | Canola | cytosol | 71.1 | 70.52 |
| PGSC0003DMT400067082 | Potato | cytosol, plastid | 73.39 | 70.46 |
| TraesCS5B01G115400.1 | Wheat | cytosol | 77.34 | 70.32 |
| TraesCS5D01G122800.1 | Wheat | cytosol | 77.34 | 70.32 |
| Bra029377.1-P | Field mustard | cytosol | 62.16 | 70.19 |
| Solyc11g018610.1.1 | Tomato | cytosol | 73.6 | 70.1 |
| PGSC0003DMT400002331 | Potato | cytosol | 72.97 | 69.5 |
| Solyc06g065380.2.1 | Tomato | cytosol, plastid | 73.18 | 69.43 |
| Zm00001d023560_P002 | Maize | cytosol | 56.13 | 69.23 |
| CDY46964 | Canola | cytosol | 69.23 | 68.94 |
| CDY16557 | Canola | cytosol | 69.65 | 68.79 |
| CDX92440 | Canola | cytosol | 70.48 | 68.62 |
| CDY40788 | Canola | cytosol | 68.81 | 68.39 |
| Bra029378.1-P | Field mustard | cytosol | 68.61 | 68.18 |
| Bra029376.1-P | Field mustard | cytosol | 64.45 | 67.1 |
| CDY46962 | Canola | cytosol | 64.24 | 66.74 |
| CDY40790 | Canola | cytosol | 64.03 | 66.67 |
| TraesCS5A01G107900.1 | Wheat | cytosol | 77.13 | 65.78 |
| KRH34983 | Soybean | cytosol | 65.49 | 65.35 |
| CDY40789 | Canola | cytosol | 67.98 | 63.62 |
| GSMUA_Achr9P25890_001 | Banana | plastid | 62.99 | 63.39 |
| GSMUA_Achr3P13910_001 | Banana | cytosol | 69.02 | 62.52 |
| GSMUA_Achr4P29450_001 | Banana | cytosol | 69.65 | 61.81 |
| GSMUA_Achr7P07810_001 | Banana | cytosol, plastid | 62.99 | 60.24 |
| GSMUA_Achr6P31900_001 | Banana | mitochondrion | 54.47 | 60.09 |
| GSMUA_Achr1P15050_001 | Banana | cytosol, plastid | 68.61 | 59.46 |
| GSMUA_Achr2P11030_001 | Banana | cytosol | 61.33 | 58.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.78 | 58.01 |
| GSMUA_Achr6P16000_001 | Banana | cytosol | 57.17 | 55.67 |
| GSMUA_Achr10P... | Banana | cytosol | 57.17 | 54.67 |
| GSMUA_Achr8P01680_001 | Banana | cytosol | 56.96 | 54.58 |
| GSMUA_Achr9P05370_001 | Banana | cytosol | 50.52 | 54.48 |
| GSMUA_Achr6P29450_001 | Banana | cytosol | 52.39 | 53.62 |
| GSMUA_Achr1P02840_001 | Banana | cytosol, plastid | 69.85 | 53.25 |
| GSMUA_Achr8P21660_001 | Banana | cytosol | 51.14 | 51.9 |
| GSMUA_Achr2P06360_001 | Banana | plasma membrane | 55.51 | 51.74 |
| GSMUA_Achr1P05040_001 | Banana | cytosol | 50.94 | 51.69 |
| GSMUA_Achr4P22740_001 | Banana | cytosol, plastid | 68.19 | 50.93 |
| GSMUA_Achr5P27580_001 | Banana | cytosol | 57.8 | 50.82 |
| GSMUA_Achr7P01360_001 | Banana | cytosol | 67.57 | 48.44 |
| GSMUA_Achr2P13980_001 | Banana | plasma membrane | 54.05 | 41.4 |
| CDX88038 | Canola | cytosol | 72.35 | 38.5 |
| Bra009697.1-P | Field mustard | cytosol | 71.93 | 37.61 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G25560_001 | EnsemblPlants:GSMUA_Achr6P25560_001 |
| EnsemblPlants:GSMUA_Achr6T25560_001 | InterPro:IPR000719 | InterPro:IPR002048 | InterPro:Kinase-like_dom_sf | UniProt:M0TA52 | PFAM:PF00069 |
| PFAM:PF13499 | PIRSF:PIRSF000654 | ScanProsite:PS00018 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS50222 |
| PANTHER:PTHR24349 | PANTHER:PTHR24349:SF166 | InterPro:Prot_kinase_dom | SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00029506D9 | : | : | : |
Description
Calcium-dependent protein kinase SK5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25560_001]
Coordinates
chr6:+:26635550..26640820
Molecular Weight (calculated)
54216.7 Da
IEP (calculated)
5.191
GRAVY (calculated)
-0.352
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSSINRPP HRPSRHSSVL PHKTPNLRDH YSIGKKLGQG EFGTTYLCDV WREIQIMHHL SEHPNVVRIR GTFEDALFVH LVMELCAGGE LFDRIIQKGH
101: YSERKAAQLI KTIVGVVEAC HSLGVMHRDL KPENFLFASA DEDAALKATD FGLSVFYKPE PMTVEYINKG RETLSEVVGS PYYVAPEVLC KLYGPESDVW
201: SAGVILYILL SGVPPFWAET EAGIFRRILQ GRLDFESQPW PGISDSAKDL IRNMLCRDPR KRYTAHQVLC HPWILDDNVA PDRPLDSAVL SRLKQFSAMN
301: KLKKMALRVI AESLSEEEIG GLKELFKMID TDNSGTITFD ELKDGLRKVG SELMESEIQT LMDAADVDKN GTIDYGEFLA ATVHMNKLER EENLASAFSY
401: FDKDGSGYIT IDELSQACRE FGLDDVRLDE MIKEVDQDND GQIDYSEFVA MMRKGNGGVG RRTMRNNINF NLADALGTEE H
101: YSERKAAQLI KTIVGVVEAC HSLGVMHRDL KPENFLFASA DEDAALKATD FGLSVFYKPE PMTVEYINKG RETLSEVVGS PYYVAPEVLC KLYGPESDVW
201: SAGVILYILL SGVPPFWAET EAGIFRRILQ GRLDFESQPW PGISDSAKDL IRNMLCRDPR KRYTAHQVLC HPWILDDNVA PDRPLDSAVL SRLKQFSAMN
301: KLKKMALRVI AESLSEEEIG GLKELFKMID TDNSGTITFD ELKDGLRKVG SELMESEIQT LMDAADVDKN GTIDYGEFLA ATVHMNKLER EENLASAFSY
401: FDKDGSGYIT IDELSQACRE FGLDDVRLDE MIKEVDQDND GQIDYSEFVA MMRKGNGGVG RRTMRNNINF NLADALGTEE H
001: MEKPNPRRPS NSVLPYETPR LRDHYLLGKK LGQGQFGTTY LCTEKSSSAN YACKSIPKRK LVCREDYEDV WREIQIMHHL SEHPNVVRIK GTYEDSVFVH
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
Arabidopsis Description
CPK4Calcium-dependent protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38869]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.