Factsheet for GSMUA_Achr2P04510_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
golgi 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT3G21160.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT3G21160.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT3G21160.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12812	Sorghum	golgi, mitochondrion, plastid	76.76	79.08
KRH58075	Soybean	extracellular	12.74	78.72
Os04t0606400-01	Rice	golgi	76.94	78.15
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	75.73	77.88
Zm00001d026257_P003	Maize	golgi, mitochondrion	75.56	77.84
GSMUA_Achr4P12680_001	Banana	golgi	59.72	75.27
CDY46554	Canola	golgi, mitochondrion	70.05	72.68
AT1G51590.1	Thale cress	golgi, mitochondrion	69.71	72.32
CDY52948	Canola	golgi, mitochondrion	69.36	72.22
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	69.54	72.01
CDY55669	Canola	golgi, mitochondrion, plastid	69.36	71.84
CDY22853	Canola	golgi, mitochondrion, plastid	69.19	71.66
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	73.32	71.12
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	73.32	71.12
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	73.32	71.12
TraesCS2D01G430000.2	Wheat	golgi	73.15	70.95
AT3G21160.1	Thale cress	golgi	69.02	70.1
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	59.72	69.12
KRH19110	Soybean	cytosol	44.06	68.45
Zm00001d019006_P001	Maize	cytosol	26.33	68.3
CDX82213	Canola	golgi, mitochondrion	65.92	68.27
CDY50074	Canola	golgi, mitochondrion, plastid	67.47	68.06
CDY19581	Canola	golgi, mitochondrion, plastid	67.64	67.88
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	67.3	67.53
Bra001816.1-P	Field mustard	golgi, mitochondrion	66.27	67.43
CDY32409	Canola	golgi, mitochondrion	65.06	67.38
Zm00001d031739_P001	Maize	cytosol	13.6	65.83
KRH02771	Soybean	golgi, plastid	65.58	65.58
GSMUA_Achr4P12690_001	Banana	mitochondrion	18.59	63.16
Zm00001d025428_P002	Maize	cytosol	11.88	61.61
Bra014291.1-P	Field mustard	mitochondrion	69.54	61.4
Zm00001d003736_P001	Maize	plastid	35.11	47.78
GSMUA_Achr10P...	Banana	golgi	34.6	33.33
GSMUA_Achr10P...	Banana	cytosol	16.01	32.63
GSMUA_Achr6P14460_001	Banana	cytosol	35.11	27.91
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	4.3	23.36
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	25.13	21.16

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr2G04510_001
EnsemblPlants:GSMUA_Achr2P04510_001	EnsemblPlants:GSMUA_Achr2T04510_001	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M0S542	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI000296E042	SEG:seg	:	:	:	:

Description

Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G04510_001]

Coordinates

chr2:-:9907808..9916373

Molecular Weight (calculated)

66159.9 Da

IEP (calculated)

6.714

GRAVY (calculated)

-0.510

Length

581 amino acids

Sequence
(BLAST)

001: MARRSSSSSR WRYLHPAYYL KRPKRLAFLF IVFVVATFAV WDRQSLVREH EAEITKLQEQ LNRLQDQLWN AGDSKQLRED STHTTDKVTH NDNVWESEID
101: PINDQRREKV KEAMLHAWNS YVKYAWGQDE LQPQTKNGVN SFGGLGATLV DSLDTLYIMG LKDEFQKARE WVATSLDFNK DYVASVFETT IRVVGGLLSA
201: YDLSGDKIFL EKAKDIADRL LPAWDTPTGI PYNRINLAHG NPHNHGWTGG ESILADSGTE QLEFIALSQR TGDPKYQQKA EKVIRQLQKT YPSDGLLPIY
301: INPHSGAAAS YSTVTFGAMG DSFYEYLLKV WIQGNKTEAV KHYREMWETS MEGLLSLIRK STPSSFSYIC EKNGGSLSNK MDELACFVPG MLALGSSGYG
401: SEKAEKILSL SKELVWTCYN FYQSTPTKLA GENYFFHGGQ DMSVGTSWNI LRPETVESLV YLWRFTGNKT YQEWGWNIFQ AFEKNSRIDS GYVGLKDVNT
501: GVKDNMMQSF FLAETLKYLY LLFSPPSVIS FDEWVFNTEA HPLKITPRND KVENDEGAEA KPQSKAVIRP FGRKQGRSDH N

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.