Factsheet for GSMUA_Achr10P01970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062870	Potato	golgi, plasma membrane	70.53	70.77
KRH57025	Soybean	extracellular	46.32	65.02
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	81.75	40.66
Solyc03g113900.2.1	Tomato	golgi	82.11	40.48
EES05547	Sorghum	endoplasmic reticulum, golgi	81.4	40.07
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	81.4	40.0
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	81.4	39.93
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	81.05	39.83
AT1G27520.1	Thale cress	golgi	79.3	39.37
KRH03356	Soybean	endoplasmic reticulum, golgi	78.95	39.34
Os02t0741300-01	Rice	mitochondrion	80.7	39.32
HORVU6Hr1G076440.3	Barley	extracellular, plastid	75.44	38.88
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	76.84	38.35
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	76.84	38.35
Zm00001d017997_P010	Maize	golgi	73.68	35.84
CDX84922	Canola	cytosol	76.84	33.69
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	42.81	17.68
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	32.63	16.01
GSMUA_Achr4P12680_001	Banana	golgi	25.26	15.62
GSMUA_Achr4P12690_001	Banana	mitochondrion	8.42	14.04
GSMUA_Achr10P...	Banana	golgi	26.67	12.6
GSMUA_Achr6P14460_001	Banana	cytosol	27.72	10.81
PGSC0003DMT400062874	Potato	cytosol	7.72	7.48
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	0.0	0.0

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr10G01970_001	EnsemblPlants:GSMUA_Achr10P01970_001
EnsemblPlants:GSMUA_Achr10T01970_001	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M0REM4	PFAM:PF01532	PRINTS:PR00747
PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	UniParc:UPI000296E7BA	SEG:seg

Description

Probable alpha-mannosidase I MNS5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G01970_001]

Coordinates

chr10:-:4705527..4712034

Molecular Weight (calculated)

32332.6 Da

IEP (calculated)

5.619

GRAVY (calculated)

-0.115

Length

285 amino acids

Sequence
(BLAST)

001: MREKVRKMFY HAYENYMVHA FPHDELKPLT KTFTDSLSEL GNLKLERLPQ NYNGSALTLV ESLSSLVVLG NYTEFERGVL WLSDNLTFDV DARVNLFECN
101: IRVLGGLVSA HILATDSKSR LEHGLYKNQL LDLARDLGQR FLPAFETPTG LPYAWINLKY GVMEDETTET STSGCGSLIL EMGALSRLTG DPRFQAAALR
201: ALRKLWSMRS PLNLLGTTLD VVTGDWIEYS SGVGAGVDSF YEYLIKAYIL FGNDEFWDMF HSSYLAVQKY FRHGPWCSTN NFLTL

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.