Factsheet for Bra032833.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	98.6	98.6
AT1G27520.1	Thale cress	golgi	88.44	87.98
CDX84922	Canola	cytosol	96.85	85.08
GSMUA_Achr10P...	Banana	cytosol	38.35	76.84
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	73.38	73.12
KRH03356	Soybean	endoplasmic reticulum, golgi	71.28	71.15
Solyc03g113900.2.1	Tomato	golgi	70.23	69.38
PGSC0003DMT400062870	Potato	golgi, plasma membrane	34.33	69.01
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	12.78	68.22
EES05547	Sorghum	endoplasmic reticulum, golgi	68.83	67.88
Os02t0741300-01	Rice	mitochondrion	68.65	67.01
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	68.13	66.95
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	67.95	66.9
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	67.78	66.72
PGSC0003DMT400062874	Potato	cytosol	34.15	66.33
HORVU6Hr1G076440.3	Barley	extracellular, plastid	64.1	66.18
KRH57025	Soybean	extracellular	22.59	63.55
Zm00001d017997_P010	Maize	golgi	62.87	61.26
Bra035984.1-P	Field mustard	extracellular, golgi	35.03	34.25
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	23.99	24.42
Bra001816.1-P	Field mustard	golgi, mitochondrion	23.99	23.99
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	23.99	23.66
Bra010804.1-P	Field mustard	golgi	22.59	21.29
Bra032351.1-P	Field mustard	golgi	22.94	21.23
Bra014291.1-P	Field mustard	mitochondrion	23.99	20.82

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra032833
EnsemblPlants:Bra032833.1	EnsemblPlants:Bra032833.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004559	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	GO:GO:0030433	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:M4EVK0	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	UniParc:UPI0002542590	SEG:seg	:

Description

AT1G27520 (E=8e-297) | glycoside hydrolase family 47 protein

Coordinates

chrA09:-:12536446..12540173

Molecular Weight (calculated)

65921.3 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.295

Length

571 amino acids

Sequence
(BLAST)

001: MFRPKHVFIC FLISFAFFID PSSQHVDDVK KQQMREKVRE MFYHAYDNYM TYAFPHDELK PITKSFTDSL SELGNLKLEH LPTDYNGSAV TLVESLSSLA
101: ILGNKTEFEK GVLWLSENLT FDVDVRVNLF ECNIRLLGGL ISAHLLAIDP TNRLIQGSYN NELLRLAEDL GKRFLPAFET PTRIPYAWIN FKKGVMENET
201: TETSTSGCGS LILEMGALSR LTGDPRFESA ALRALRQLWR MRSSLDLLGT TLDVVTGEWL EYSSGIGAGV DSFYEYLMKA YILFGKEDYW RMFRSAYLAS
301: QKYFRYGPWY HEANMWSGKP TYWQLTSLQA FWPGLQVLVG DVAAANSSHW EFFHAWEKFG VIPERYLLDH QMIHPTERYY PLRPELAEST FYLYQATKDP
401: WYLDVGEAMV KSLNRYTKVA GGFASVRDVT TMQLEDHQHS FFLAETCKYL YLLFDDSFVA KRNYIFTTEG HPIQVMRSWH EKLPESYFSG NWTFSKSGEW
501: ESGASALSMK VCPSIAPNSR LREQHRESVC HVPDQKIDHK CWSNRECGVD ATTCRQRSCS EVGFCGLWNP L

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.