Factsheet for Bra035984.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 4
plasma membrane 4
plastid 2
cytosol 1
extracellular 4
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol, mitochondrion, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68502	Canola	extracellular, golgi	59.08	97.46
CDX96894	Canola	extracellular, golgi	97.6	92.53
AT5G43710.1	Thale cress	endoplasmic reticulum	83.9	78.53
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	64.73	61.07
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	63.18	59.71
Zm00001d012643_P007	Maize	golgi	62.67	56.22
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	64.55	55.28
KXG33484	Sorghum	golgi	61.99	54.85
TraesCS3A01G322000.1	Wheat	golgi	61.99	54.11
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	61.3	53.51
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	61.99	53.47
Os01t0773600-01	Rice	mitochondrion	62.5	53.36
HORVU3Hr1G075850.2	Barley	plastid	61.99	52.01
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	60.27	51.01
PGSC0003DMT400041971	Potato	extracellular, golgi	24.66	46.01
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	34.25	35.03
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	20.55	21.39
Bra001816.1-P	Field mustard	golgi, mitochondrion	20.89	21.37
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	20.03	20.21
Bra010804.1-P	Field mustard	golgi	20.72	19.97
Bra032351.1-P	Field mustard	golgi	20.89	19.77
Bra014291.1-P	Field mustard	mitochondrion	20.55	18.24

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra035984
EnsemblPlants:Bra035984.1	EnsemblPlants:Bra035984.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004559	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	GO:GO:0030433	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:M4F4I4	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	UniParc:UPI000253E659	SEG:seg	:

Description

AT5G43710 (E=1e-125) | glycoside hydrolase family 47 protein

Coordinates

chrScaffold000111:-:251813..255261

Molecular Weight (calculated)

65335.3 Da

IEP (calculated)

5.022

GRAVY (calculated)

-0.234

Length

584 amino acids

Sequence
(BLAST)

001: MILMESNKLR WGLCYAIFIS LTLSSLVRDL GVSAEGVNPH EAKQLRDEVR EMFYHAFDGY MNNAFPLDEL RPLSCQGEDT LGGYALTLID SLDTLALLGD
101: RERFTSSVQW IGKSLQFNIN KTVSVFETTI RVLGGLLSAH LIASDYATGM RIPSYDNELL VLAEDLARRM LPAFDTPTGI PYGSITSTAG GGTLTLEFGV
201: LSRLTNDPVF EQVAKNAVRG LWARRSTLDL VGAHINVFTG EWTQKDAGIG TSIDSFYEYL LKAYILFGDE EYLYIFQEAY GSAMHHLHKD PWYVEVNMDS
301: GAIVWPVFNS LQAFWPGLQV LAGDVDPAIR THTAFFSVWK RYGFTPEGFN LATLSVQYGQ KSYPLRPELI ESTYWLYKAT RDPRYLDAGR DFVASLQYGA
401: KCPCAVDSDN LVDNGPYKYI FSTEGHLLPL TPQISLAREH CSYFGGYCPR NATKFEQSND DHQVPEIELG HHSNIYPYHE SFPVTGLIKG LCPRLSHAQK
501: YGLSYVLPEK TEREDVKRPK PVITSRSIVL VSDQSVEKRP QEEGFTSESE PIMSISGGGS SSDQTGQKLT LLESETDDKR VYSS

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.