Factsheet for TraesCS3A01G322000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	98.21	97.05
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	97.01	97.01
CDY68502	Canola	extracellular, golgi	40.66	76.84
Zm00001d012643_P007	Maize	golgi	70.85	72.81
Os01t0773600-01	Rice	mitochondrion	73.99	72.37
HORVU3Hr1G075850.2	Barley	plastid	74.59	71.7
KXG33484	Sorghum	golgi	68.91	69.85
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	60.69	65.7
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	60.69	65.59
AT5G43710.1	Thale cress	endoplasmic reticulum	60.84	65.22
CDX96894	Canola	extracellular, golgi	58.59	63.64
Bra035984.1-P	Field mustard	extracellular, golgi	54.11	61.99
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	62.63	60.72
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	59.64	58.5
PGSC0003DMT400041971	Potato	extracellular, golgi	26.46	56.55
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	31.99	36.83
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	20.93	23.37
TraesCS1A01G126300.2	Wheat	plastid	21.08	21.59

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004559	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0030433	InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF41	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G322000
EnsemblPlants:TraesCS3A01G322000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:565465284..565475277

Molecular Weight (calculated)

74013.8 Da

IEP (calculated)

4.624

GRAVY (calculated)

-0.203

Length

669 amino acids

Sequence
(BLAST)

001: MRLRLRRQGR ASPLLCLSAA ILAAALLPGA AVADGVTPSE ARLLRDEVKD MFYHAFDGYM QHAFPLDELR PLSCQGEDSL GGYALTLIDS LDTLALLGDK
101: ERFAAGVEWV GKNVRFDINK TVSVFETNIR ILGGLLSAHL IASDYATGME IESYDGQLLH LSVDLAQRLL PAFDTPTGIP FGSVNLLYGV DDDESKITST
201: AGGGTLTLEF GVLSRLTNNT VFEQVAKKSV RGIWARRSKL NLVGAHINVF TGEWTQKDAG IGTSIDSFYE YVLKAYLLFG DEEYLYVFQE AYKAAMHYLH
301: HDPWYIEVNM NSGATVWPLF NSLQAFWPGL QVLAGDVDPA IRTHAAFFSV WKKYGFTPEG FNLATSTVQN GQRSYPLRPE LIESTYWLFK ATRDYRYLDV
401: GRDILASLQY AAKCPCGYCH ISDVETHKQD DHMESFFLAE TVKYLWLLFD LAVGPDNIVE NGPYKYIFST EGHLLPATPE ITLVDEHCLY FGDRGYGSGD
501: GSSIQQSANC AQFDERRTVS SQNSLSNVLF TTRGYIKGVC PGLSHAQKLG ISYHGEEDNT QNSRSHEHPD ESYVDQSSVQ IQSSSVILIS HPATSPPDEP
601: LKTRSRAQHL ENIVVTGDSE PIEVTDATGG SSEGNTEIFS EVTLSISEQI EVTAEEIVTQ DNHIEDSTS

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.