Factsheet for PGSC0003DMT400041971

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	83.71	42.39
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	62.62	31.66
PGSC0003DMT400062874	Potato	cytosol	27.8	29.59
AT5G43710.1	Thale cress	endoplasmic reticulum	58.15	29.17
CDX96894	Canola	extracellular, golgi	56.55	28.73
Zm00001d012643_P007	Maize	golgi	58.15	27.96
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	60.7	27.86
KXG33484	Sorghum	golgi	56.55	26.82
Os01t0773600-01	Rice	mitochondrion	57.83	26.46
TraesCS3A01G322000.1	Wheat	golgi	56.55	26.46
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	57.83	26.23
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	55.91	26.16
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	56.23	26.0
HORVU3Hr1G075850.2	Barley	plastid	56.23	25.29
Bra035984.1-P	Field mustard	extracellular, golgi	46.01	24.66
PGSC0003DMT400023755	Potato	cytosol	15.02	17.94
CDY68502	Canola	extracellular, golgi	14.7	12.99
PGSC0003DMT400062870	Potato	golgi, plasma membrane	0.96	1.06

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341
UniProt:M1BCA0	PFAM:PF01532	EnsemblPlantsGene:PGSC0003DMG400016278	PGSC:PGSC0003DMG400016278	EnsemblPlants:PGSC0003DMT400041971	PRINTS:PR00747
PANTHER:PTHR11742	PANTHER:PTHR11742:SF41	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	UniParc:UPI0002950055
SEG:seg	:	:	:	:	:

Description

Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA [Source:PGSC_GENE;Acc:PGSC0003DMG400016278]

Coordinates

chr6:-:40021571..40031065

Molecular Weight (calculated)

35091.7 Da

IEP (calculated)

5.947

GRAVY (calculated)

-0.532

Length

313 amino acids

Sequence
(BLAST)

001: MNSAALVWPL FNSLQAFWPG LQVLAGDIEP AIRTHAAFFS VWRRYGFTPE GFNLATLSVQ QGQKSYPLRP ELIESTYWLY KATRDPRYLD AGREILASLQ
101: YGARCTCGYC HISDVEFHKQ EDHMESFFLA ETVKYLWLLF DLAAGPDNLV ENGPYKYIFS TEGHLLPATP QISLVREHCS YFGAYCRNSN LRLKTHSSES
201: AQTNSSGSQT RHADSSFLSR SSYQSSSPVS GLKGLCPGLT YEQRFGISFM SPVDPSSEDE NSSQRETTEV QSHSVVLNSN PDPEVSLSGP HNDHDNDPAR
301: IPQEESPSSK QKR

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.