CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
plastid 1
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012643_P007	Maize	golgi	86.82	88.02
CDY68502	Canola	extracellular, golgi	40.76	75.99
Os01t0773600-01	Rice	mitochondrion	76.21	73.54
TraesCS3A01G322000.1	Wheat	golgi	69.85	68.91
HORVU3Hr1G075850.2	Barley	plastid	72.58	68.82
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	69.39	68.46
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	69.39	67.65
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	61.52	65.7
AT5G43710.1	Thale cress	endoplasmic reticulum	61.36	64.9
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	59.85	63.81
CDX96894	Canola	extracellular, golgi	59.39	63.64
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	66.21	63.33
Bra035984.1-P	Field mustard	extracellular, golgi	54.85	61.99
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	61.36	59.38
PGSC0003DMT400041971	Potato	extracellular, golgi	26.82	56.55
EES05547	Sorghum	endoplasmic reticulum, golgi	33.79	38.51
EES12812	Sorghum	golgi, mitochondrion, plastid	21.97	25.71
EES19212	Sorghum	plastid	21.82	22.43

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	EntrezGene:8072143
UniProt:A0A1B6Q6D6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004559	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	GO:GO:0030433	InterPro:Glyco_hydro_47	InterPro:IPR012341
EnsemblPlants:KXG33484	ProteinID:KXG33484	ProteinID:KXG33484.1	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF41	EnsemblPlantsGene:SORBI_3003G312700	SUPFAM:SSF48225	unigene:Sbi.21701	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00081AD702	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:64103313..64122587

Molecular Weight (calculated)

72882.3 Da

IEP (calculated)

4.812

GRAVY (calculated)

-0.249

Length

660 amino acids

Sequence
(BLAST)

001: MQPIRRRHRG FPLLCLSAAL LAAATLLPGA AVAEGVTPSE ARRLRDEVKD MFYHAFDGYM KYAFPLDELR PLSCQGEDSL GGYALTLIDS LDTLALLGDK
101: EKFGAAVEWV GKNVRFDINK TVSVFETNIR ILGGLLSAHL IASDYATGMR IQSYDDQLLH LAADLAQRLL PAFDTPTGIP FGSVNLMYGV DENESKITST
201: AGGGTLTLEF GILSRLTNNT VFERVTKKSV RGIWSRRSKL NLVGAHINVF TGEWTQKDAG IGTSIDSFYE YLLKAYLLFG DEEYLYIFQE AYKAAMHYLH
301: HDPWYVEVNM NSGATVWPLF NSLQAFWPGL QVLAGDVDPA IRTHAAFFSV WKKYGFTPEG FNLATSTVQN GQRSYPLRPE LIESTYWLFK ATRDHRYLDV
401: GRDILASLQY GARCPCGYCH IADVETHKQD DHMESFFLAE TVKYLWLLFD LAAGPDNIVE SGPYKYIFST EGHLLPVTPE IALVDEHCSY FGAFCNGGAD
501: HGYGASASST KHQNGNYTQL DDIQTHSSLY STSNVLFKTG GYIKGVCPGL THAQKLGISY SDGEDNFIEQ TSESREHHGE SAVESSIQDQ SSSIILISHP
601: VTSQQDEALE SGSGSQDHGN IVVTSDSDSD SDSTSRDNIV GANTEELMED IEGTSGQDKR

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.