CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035984.1-P	Field mustard	extracellular, golgi	92.53	97.6
CDY68502	Canola	extracellular, golgi	55.68	96.89
AT5G43710.1	Thale cress	endoplasmic reticulum	85.06	83.97
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	66.07	65.75
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	64.94	64.72
Zm00001d012643_P007	Maize	golgi	64.29	60.83
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	66.23	59.82
KXG33484	Sorghum	golgi	63.64	59.39
TraesCS3A01G322000.1	Wheat	golgi	63.64	58.59
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.99	58.0
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	63.64	57.9
Os01t0773600-01	Rice	mitochondrion	63.64	57.31
PGSC0003DMT400041971	Potato	extracellular, golgi	28.73	56.55
HORVU3Hr1G075850.2	Barley	plastid	63.31	56.03
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	61.69	55.07
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	35.88	38.7
CDX84922	Canola	cytosol	36.36	34.46
CDY46554	Canola	golgi, mitochondrion	22.4	24.64
CDY55669	Canola	golgi, mitochondrion, plastid	22.4	24.6
CDX82213	Canola	golgi, mitochondrion	22.24	24.42
CDY52948	Canola	golgi, mitochondrion	22.08	24.37
CDY22853	Canola	golgi, mitochondrion, plastid	22.08	24.24
CDY32409	Canola	golgi, mitochondrion	21.92	24.06
CDY50074	Canola	golgi, mitochondrion, plastid	22.08	23.61
CDY19581	Canola	golgi, mitochondrion, plastid	22.08	23.49
CDY26300	Canola	golgi	22.56	22.53
CDY35266	Canola	golgi	22.24	22.46
CDX90221	Canola	golgi	22.08	22.44
CDX99872	Canola	golgi, plastid	22.08	22.04
CDY14886	Canola	golgi	6.49	20.1

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:A0A078E864
EnsemblPlants:CDX96894	ProteinID:CDX96894	ProteinID:CDX96894.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00103773001
InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	UniPathway:UPA00378	UniParc:UPI0004EDD0BB	SEG:seg

Description

BnaC02g30320D

Coordinates

chrLK031896:-:146397..150214

Molecular Weight (calculated)

69174.6 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.236

Length

616 amino acids

Sequence
(BLAST)

001: MESNKLRWGL CYAIFISLTL SSLVRDLGVS AEGVNPHEAK QLRDEVREMF YHAFDGYMNN AFPLDELKPL SCQGEDTLGG YALTLIDSLD TLALLGDRES
101: FTSSVQWIGK NLQFNINKTV SVFETTIRVL GGLLSAHLIA SDCATGMRIP SYDNELLVLA EDLARRMLPA FDTPTGIPYG SITSTAGGGT LTLEFGVLSR
201: LTNDPVFEQV AKNAVRGLWA RRSTLDLVGA HINVFTGEWT QKDAGIGTSI DSFYEYLLKA YILFGDEEYL YIFQEAYGSA MHHLHKDPWY VEVNMDSGAI
301: VWPVFNSLQA FWPGLQVLAG DVDPAIRTHT AFFSVWKRYG FTPEGFNLAT LSVQYGQKSY PLRPELIEST YWLYKATRDP RYLDAGRDFV ASLQYGAKCP
401: CGYCHITDVE LHKQEDHMES FFLAETVKYL WLLFDLAVDS DNLVDNGPYK YIFSTEGHLL PLTPQISLAR EHCSYFGGYC PRNATKFEQS NDDHQVPEIE
501: LDHHSNIYPY HESFPVTGLI KGLCPRLSHA QKYGLSYVLP EKTEREDVKR PKPVITSRSI VLVSDQTVEK RPQEEGFTSE SEPIMSISGG GSSSDQTGQE
601: LTLLESETDD KRVYSS

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.