Factsheet for TraesCS3B01G344300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	97.05	98.21
TraesCS3A01G322000.1	Wheat	golgi	97.05	98.21
CDY68502	Canola	extracellular, golgi	40.18	76.84
Os01t0773600-01	Rice	mitochondrion	73.12	72.37
Zm00001d012643_P007	Maize	golgi	69.57	72.35
HORVU3Hr1G075850.2	Barley	plastid	73.86	71.84
KXG33484	Sorghum	golgi	67.65	69.39
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	60.27	66.02
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	59.97	65.59
AT5G43710.1	Thale cress	endoplasmic reticulum	60.12	65.22
CDX96894	Canola	extracellular, golgi	57.9	63.64
Bra035984.1-P	Field mustard	extracellular, golgi	53.47	61.99
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	62.19	61.01
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	59.08	58.65
PGSC0003DMT400041971	Potato	extracellular, golgi	26.0	56.23
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	31.91	37.24
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	20.68	23.37
TraesCS1B01G145500.1	Wheat	plastid	20.97	22.08

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004559	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019538
GO:GO:0030433	InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF41	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G344300
EnsemblPlants:TraesCS3B01G344300.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:553571542..553581109

Molecular Weight (calculated)

74914.9 Da

IEP (calculated)

4.626

GRAVY (calculated)

-0.194

Length

677 amino acids

Sequence
(BLAST)

001: MMQPMRLRLR RQGRASALLC LSAAILAAAL LPGAAVADGV TPSEARLLRD EVKDMFYHAF DGYMQHAFPL DELRPLSCQG EDSLGGYALT LIDSLDTLAL
101: LGDKERFAAG VEWVGKNVRF DINKTVSVFE TNIRILGGLL SAHLIASDYA TGMKIESYDD QLLHLSVDLA QRLLPAFDTP TVCLVGIPFG SVNLLYGVDD
201: DESKITSTAG GGTLALEFGV LSRLTNNTVF EQVAKNSVRG IWARRSKLNL VGAHINVFTG EWTQKDAGIG TSIDSFYEYV LKAYLLFGDE EYLYVFQEAY
301: KAAMHYLHHD PWYIEVNMNS GATVWPLFNS LQAFWPGLQV LAGDVDPAIR THAAFFSVWK KYGFTPEGFN LATSTVQNGQ RSYPLRPELI ESTYWLFKAT
401: RDYRYLDVGR DILASLQYAA KCPCGYCHIS DVETHKQDDH MESFFLAETV KYLWLLFDLA VGPDNIVENG PYKYIFSTEG HLLPATPEIT LVDEHCLHFG
501: DRGYDSGDGS SIQQSANCAQ FDERRTVSSQ NSLSNVLFTT RGYIKGVCPG LSHAQKLGIS YHAEEDNTQN SRSHEHPDES YVDQSSVQIQ SSSVILISHP
601: ATSPPDEPSK TRSRAQHLEN IVVTGDSEPI EVTDATGGSS EGNTEFFSEV TLSISEQIEV TAEEIASQDN HIEDSTS

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.