Factsheet for Solyc06g053860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041971	Potato	extracellular, golgi	42.39	83.71
CDY68502	Canola	extracellular, golgi	44.66	77.97
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	69.09	68.98
AT5G43710.1	Thale cress	endoplasmic reticulum	67.31	66.67
CDX96894	Canola	extracellular, golgi	64.72	64.94
Zm00001d012643_P007	Maize	golgi	66.83	63.44
Bra035984.1-P	Field mustard	extracellular, golgi	59.71	63.18
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	69.42	62.9
KXG33484	Sorghum	golgi	65.7	61.52
TraesCS3A01G322000.1	Wheat	golgi	65.7	60.69
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	65.53	60.54
Os01t0773600-01	Rice	mitochondrion	66.83	60.38
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	66.02	60.27
HORVU3Hr1G075850.2	Barley	plastid	66.5	59.05
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	65.05	58.26
Solyc03g113900.2.1	Tomato	golgi	35.92	38.41
Solyc03g123900.2.1	Tomato	extracellular, nucleus	22.98	24.52
Solyc06g063260.2.1	Tomato	golgi, mitochondrion	22.17	24.25
Solyc02g070520.2.1	Tomato	nucleus	22.82	22.42

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006491	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:K4C673	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g053860.2	EnsemblPlants:Solyc06g053860.2.1	UniParc:UPI0002765967
SEG:seg	:	:	:	:	:

Description

Alpha-mannosidase I MNS4 [Source:Projected from Arabidopsis thaliana (AT5G43710) UniProtKB/Swiss-Prot;Acc:Q9FG93]

Coordinates

chr6:-:36722238..36750047

Molecular Weight (calculated)

69121.7 Da

IEP (calculated)

5.362

GRAVY (calculated)

-0.253

Length

618 amino acids

Sequence
(BLAST)

001: MEAPKLLLLI LLIPCDLFIG KSLGDGVTHE ESKELRDEVR EMFYHAFNGY MNHAFPRDEL RPLSCGGEDT LGGYALTLID SLDTLALLGD RERFTASVEW
101: IGKNLRFDIN KTVSIFETTI RILGGLISAH LIASDHNTGM KIPSYDDELL HLAEDLARRM LPAFDTPTGI PFGSVNLLHG VDENESKITS TAGGGTLTLE
201: FGILSRLIND PIFEQVSKNA VRGLWARRSK INLVGAHIDV FSGEWTQKDA GIGTSIDSFY EYLLKAYLLF GDEEYLFIFQ EAYKAAMNYL FSDPWYVEVN
301: MNSAALVWPL FNSLQAFWPG LQVLAGDIEP AIRTHAAFFS VWKRYGFTPE GFNLATLSVQ QGQKSYPLRP ELIESTYWLY KATRDPRYLD AGREILASLQ
401: YGARCTCGYC HISDVEFHKQ EDHMESFFLA ETVKYLWLLF DLAAGPDNLV ENGPYKYVFS TEGHLLPVTP QISLVREHCS YFGAYCRNSN LRLKTHSAVS
501: AQTNSSGSQT RHADSSFLSR SSYQSSSPVS GLKVRNLMGL CPGLTYEQRF GISFMSPVDS SSEDENSSQR KPTEVQGHSL LLNSNPNPEV SLSGPHNDHD
601: NSPARVPQEE SPSSKPKR

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.