Factsheet for Solyc03g113900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062874	Potato	cytosol	49.65	97.62
PGSC0003DMT400062870	Potato	golgi, plasma membrane	42.39	86.27
GSMUA_Achr10P...	Banana	cytosol	40.48	82.11
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	77.16	77.84
KRH03356	Soybean	endoplasmic reticulum, golgi	74.39	75.17
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	13.49	72.9
AT1G27520.1	Thale cress	golgi	71.63	72.13
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	69.72	70.58
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	69.38	70.23
EES05547	Sorghum	endoplasmic reticulum, golgi	69.38	69.26
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	69.55	69.19
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	69.38	69.14
Os02t0741300-01	Rice	mitochondrion	69.55	68.72
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	68.86	68.62
KRH57025	Soybean	extracellular	24.05	68.47
HORVU6Hr1G076440.3	Barley	extracellular, plastid	65.4	68.35
Zm00001d017997_P010	Maize	golgi	64.36	63.48
CDX84922	Canola	cytosol	70.24	62.46
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	38.41	35.92
Solyc03g123900.2.1	Tomato	extracellular, nucleus	24.05	24.01
Solyc06g063260.2.1	Tomato	golgi, mitochondrion	22.84	23.36
Solyc02g070520.2.1	Tomato	nucleus	21.8	20.03

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006491
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:K4BKP2	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	EnsemblPlantsGene:Solyc03g113900.2
EnsemblPlants:Solyc03g113900.2.1	TMHMM:TMhelix	UniParc:UPI0002767FDB	SEG:seg	:	:

Description

alpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:K4BKP2]

Coordinates

chr3:+:63938421..63944006

Molecular Weight (calculated)

66170.3 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.189

Length

578 amino acids

Sequence
(BLAST)

001: MFQSTVVKWI LLYLVISPTI FIICLSDLHS NNLLAAKRKR MSERVRKMFY HAYDNYMMYA FPHDELKPLT KTFTDSLSEL GNLKLEHLPQ QYNGSALTLI
101: ESLSSLVILG NYTEFEKAII WLSENLSFDV DARVNLFECN IRVLGGLVSA HILATDSTNR LVQLIYKNQL LDLAEDLGRR FLPAFKTPTG LPYAWINLKH
201: GVIVDETTET STSGCGSLIL EMGALSRLTG DTRFETAALR ALRKLWSMRS SLNLLGTTLD VATGDWIEYS SGIGAGVDSF YEYLMKAYVL FGRDEIWKMF
301: QSAYIGVQKY FRHGPWYHEA DMRTGTATYW QLTSLQAFWP GLQVLVGDIE AANSSHREFF KVWKKYGVLP ERYLLDHQVL HPTEKYYPLR PELAESTFYL
401: YQATKDPWYM EVGESIMNSL NAHTRVKGGF ASIRDVTTMQ LEDHQHSFFL AETCKYLYLL FDDSFLRNQN YIFTTEGHPL PVRINWHEKL PRVYNLSDGS
501: SIKTGKQRKR SSAMSLQICP ASMIHHEPNA RRLESACHIP DTGADHRCFS DDDCGVDANT CRRRSCSLAG YCGLWSLI

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.