CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	98.6	98.6
AT1G27520.1	Thale cress	golgi	88.09	87.63
CDX84922	Canola	cytosol	97.2	85.38
GSMUA_Achr10P...	Banana	cytosol	38.35	76.84
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	73.38	73.12
KRH03356	Soybean	endoplasmic reticulum, golgi	71.45	71.33
Solyc03g113900.2.1	Tomato	golgi	70.58	69.72
PGSC0003DMT400062870	Potato	golgi, plasma membrane	34.5	69.37
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	12.96	69.16
EES05547	Sorghum	endoplasmic reticulum, golgi	69.0	68.05
Os02t0741300-01	Rice	mitochondrion	68.83	67.18
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	68.3	67.13
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	68.13	67.07
PGSC0003DMT400062874	Potato	cytosol	34.5	67.01
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	67.95	66.9
HORVU6Hr1G076440.3	Barley	extracellular, plastid	64.27	66.37
KRH57025	Soybean	extracellular	22.42	63.05
Zm00001d017997_P010	Maize	golgi	63.22	61.6
CDY68502	Canola	extracellular, golgi	28.37	45.76
CDX96894	Canola	extracellular, golgi	38.7	35.88
CDY46554	Canola	golgi, mitochondrion	23.82	24.29
CDY22853	Canola	golgi, mitochondrion, plastid	23.82	24.24
CDX82213	Canola	golgi, mitochondrion	23.82	24.24
CDY55669	Canola	golgi, mitochondrion, plastid	23.64	24.06
CDY52948	Canola	golgi, mitochondrion	23.47	24.01
CDY50074	Canola	golgi, mitochondrion, plastid	23.64	23.44
CDY32409	Canola	golgi, mitochondrion	22.94	23.35
CDY19581	Canola	golgi, mitochondrion, plastid	23.64	23.32
CDY26300	Canola	golgi	22.94	21.23
CDX99872	Canola	golgi, plastid	22.94	21.23
CDY35266	Canola	golgi	22.59	21.15
CDX90221	Canola	golgi	22.42	21.12
CDY14886	Canola	golgi	5.43	15.58

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:A0A078GM38
UniProt:A0A078GM38	EnsemblPlants:CDY27620	ProteinID:CDY27620	ProteinID:CDY27620.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00038369001	InterPro:Glyco_hydro_47	InterPro:IPR012341
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
SignalP:SignalP-noTM	UniPathway:UPA00378	UniParc:UPI0004EF389E	SEG:seg	:	:

Description

BnaA09g27870Dalpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:A0A078GM38]

Coordinates

chrLK032207:+:345648..349596

Molecular Weight (calculated)

65749.2 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.294

Length

571 amino acids

Sequence
(BLAST)

001: MFRPKHVFIC FLISFAFFID PSSQHVDDVK KQQMREKVRE MFYHAYDNYM TYAFPHDELK PITKSFTDSL SELGNLKLEH LPTGYNGSAV TLVESLSSLA
101: ILGNKTEFEK GVLWLSENLK FDVDVRVNLF ECNIRLLGGL ISAHLLAIDP TNRLIQGSYD NQLLRLAEDL GKRFLPAFET PTRIPYAWIN FKKGVMENET
201: TETSTSGCGS LILEMGALSR LTGDPRFESA ALRALRQLWR MRSSLDLLGT TLDVVTGEWL EYSSGIGAGV DSFYEYLMKA YILFGKEDYW QMFRSAYLAS
301: QKYFRYGPWY HEANMWSGKP TYWQLTSLQA FWPGLQVLVG DVAAANSSHR EFFHAWEKFG VIPERYLLDH QMIHPTERYY PLRPELAEST FYLYQATKDP
401: WYLDVGEAMV KSLNRYTKVA GGFASVRDVT TMQLEDHQHS FFLAETCKYL YLLFDDSFVA KRNYIFTTEG HPIQVMSSWH EKLPESYFSG NWTFSKSGEW
501: ESGASALSMK VCPSVAPNSR LREQHRESVC HVPDQKIDHK CWSNRECGVD ATTCRQRSCS EVGFCGLWNP L

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.