Factsheet for TraesCS6D01G289200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	98.79	98.62
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	97.93	97.93
HORVU6Hr1G076440.3	Barley	extracellular, plastid	87.41	91.68
EES05547	Sorghum	endoplasmic reticulum, golgi	86.55	86.7
Os02t0741300-01	Rice	mitochondrion	87.41	86.67
GSMUA_Achr10P...	Banana	cytosol	40.0	81.4
Zm00001d017997_P010	Maize	golgi	78.1	77.3
KRH03356	Soybean	endoplasmic reticulum, golgi	70.34	71.33
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	70.34	71.2
Solyc03g113900.2.1	Tomato	golgi	69.14	69.38
AT1G27520.1	Thale cress	golgi	68.45	69.16
PGSC0003DMT400062870	Potato	golgi, plasma membrane	33.62	68.66
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	12.59	68.22
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	67.07	68.13
PGSC0003DMT400062874	Potato	cytosol	34.48	68.03
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	66.9	67.95
KRH57025	Soybean	extracellular	22.24	63.55
CDX84922	Canola	cytosol	67.07	59.85
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	37.59	32.59
TraesCS2D01G430000.2	Wheat	golgi	25.0	24.21
TraesCS1D01G127200.2	Wheat	plastid	23.28	21.0

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016787	InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G289200
EnsemblPlants:TraesCS6D01G289200.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:400079174..400083756

Molecular Weight (calculated)

65405.4 Da

IEP (calculated)

6.061

GRAVY (calculated)

-0.181

Length

580 amino acids

Sequence
(BLAST)

001: MRSPRPARLA AVALLLAALA AAAAAPAAAA SRDGYGRARR LRMRGKVVEM FYHAYDNYMA YAFPHDELKP LTKGFTDSLS ELGNLNLEHL PQDYNGSALT
101: LVESLSSLVV LGNLTEFDRG VSWLSENLTF DVDARVNLFE CNIRLLGGLI SAHILAKDYS SQNKDGVYQN QLLHLAENLG SRFLPAFETP TGLPYAWINL
201: KYGVMENETT ETSTSGCGSL ILEMGALSRL TGDSRYEAAA LRALRKLWSM RSSLNLVGST LDVLSGNWIE YSSGIGAGVD SFYEYLIKAY ILFGSDEYWD
301: MFHSAYLAVQ KYFRHGPWYH EADIRTGEAT HWQLTSLQAF WPGVQTLLGD VAAANLSHRE FYNVWQRFGV LPERYLLDYG ILHPTEKYYP LRPEFAESTF
401: YLYQATKDPW YLEVGEAIIG SLNYYTKVEG GFASIRDVST MNLEDHQHSF FLSETCKYLF LLYDDSFLRN KNYIFTTEGH PLPVMSTWHE KTPRLDVPTN
501: WTVVKDGNQP IRASALSSKV CPETIFRQNV GSPWESACHI PDVFPSHRCR ADDDCGIESV TCKRRTCSMA GYCSLWLAVY

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.