CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0741300-01	Rice	mitochondrion	89.81	88.89
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	86.7	86.55
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	86.18	86.03
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	86.18	85.89
Zm00001d017997_P010	Maize	golgi	86.7	85.67
HORVU6Hr1G076440.3	Barley	extracellular, plastid	79.45	83.18
GSMUA_Achr10P...	Banana	cytosol	40.07	81.4
KRH03356	Soybean	endoplasmic reticulum, golgi	71.85	72.73
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	70.29	71.03
AT1G27520.1	Thale cress	golgi	69.6	70.21
Solyc03g113900.2.1	Tomato	golgi	69.26	69.38
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	12.78	69.16
PGSC0003DMT400062874	Potato	cytosol	35.06	69.05
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	68.05	69.0
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	67.88	68.83
PGSC0003DMT400062870	Potato	golgi, plasma membrane	33.16	67.61
KRH57025	Soybean	extracellular	22.11	63.05
CDX84922	Canola	cytosol	68.22	60.77
KXG33484	Sorghum	golgi	38.51	33.79
EES12812	Sorghum	golgi, mitochondrion, plastid	24.7	25.35
EES19212	Sorghum	plastid	23.14	20.87

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	UniProt:C5XYW9
EnsemblPlants:EES05547	ProteinID:EES05547	ProteinID:EES05547.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	GO:GO:0030433	InterPro:Glyco_hydro_47
InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	EnsemblPlantsGene:SORBI_3004G242500
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0007F27697	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:59071703..59076549

Molecular Weight (calculated)

65737.2 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.154

Length

579 amino acids

Sequence
(BLAST)

001: MRSPGPRLPA PARLAVAALL LAALTGLAVG ADGYGRARRL HMKTKVLEMF YHAYDNYMTY AFPHDELKPL TKSFTDSLSE LGNLNLEHLP QDYSGSALTL
101: VESLSSLVVL GNLTEFERGV LWLSENLTFD VDARINLFEC NIRLLGGLIS AHILAKDYNS QFKHGLYQDQ LLHLAESLGN RFLPAFETPT GLPYAWINLK
201: YGVMENETTE TSTSGCGSLI LEMGVLSRLT GDSRYEAAAL RALRKLWSMR SSLNLVGTTL DVLTGKWIEY SSGIGAGVDS FYEYLIKAYI LFGSDDYWDM
301: FHSAYLAVQK YFRHGPWYHE ADMRTGEATH WQLTSLQAFW PGLQTLLGDV TAANLSHREF YNIWQRFGVL PERYLLDYGM LHPTEKYYPL RPEFAESTFY
401: LYQATKDPWY LEVGEAIVGS LNYYTKVDGG FASVRDVSTM KLEDHQHSFF LSETCKYLFL LYDDSFLRNQ NYIFTTEGHP LPIRSTWHEK FPAAYVPSNW
501: TFVKDEIQPI RVSALSSQVC PETIFRKSVG TPWESACHVP DAHASHRCRT DDDCGIEAIT CKKRTCSMAG YCGLWLVIY

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.