CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	85.38	97.2
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	85.08	96.85
AT1G27520.1	Thale cress	golgi	77.54	87.8
GSMUA_Achr10P...	Banana	cytosol	33.69	76.84
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	65.23	74.0
KRH03356	Soybean	endoplasmic reticulum, golgi	63.38	72.03
Solyc03g113900.2.1	Tomato	golgi	62.46	70.24
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	11.38	69.16
PGSC0003DMT400062870	Potato	golgi, plasma membrane	30.15	69.01
EES05547	Sorghum	endoplasmic reticulum, golgi	60.77	68.22
PGSC0003DMT400062874	Potato	cytosol	30.62	67.69
Os02t0741300-01	Rice	mitochondrion	60.62	67.35
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	60.0	67.13
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	59.85	67.07
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	59.69	66.9
HORVU6Hr1G076440.3	Barley	extracellular, plastid	56.46	66.37
KRH57025	Soybean	extracellular	20.15	64.53
Zm00001d017997_P010	Maize	golgi	55.69	61.77
CDY68502	Canola	extracellular, golgi	25.23	46.33
CDX96894	Canola	extracellular, golgi	34.46	36.36
CDY22853	Canola	golgi, mitochondrion, plastid	21.38	24.78
CDY46554	Canola	golgi, mitochondrion	21.23	24.64
CDY55669	Canola	golgi, mitochondrion, plastid	21.23	24.6
CDY52948	Canola	golgi, mitochondrion	20.92	24.37
CDX82213	Canola	golgi, mitochondrion	20.92	24.24
CDY50074	Canola	golgi, mitochondrion, plastid	20.92	23.61
CDY19581	Canola	golgi, mitochondrion, plastid	20.92	23.49
CDY32409	Canola	golgi, mitochondrion	20.15	23.35
CDY26300	Canola	golgi	20.31	21.39
CDX99872	Canola	golgi, plastid	20.31	21.39
CDY35266	Canola	golgi	20.0	21.31
CDX90221	Canola	golgi	19.85	21.29
CDY14886	Canola	golgi	4.62	15.08

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:A0A078D6W0
EnsemblPlants:CDX84922	ProteinID:CDX84922	ProteinID:CDX84922.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00142272001
InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	UniPathway:UPA00378	UniParc:UPI0004EE8F42	SEG:seg	:

Description

BnaC05g21330D

Coordinates

chrLK031839:-:246815..252339

Molecular Weight (calculated)

74378.4 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.296

Length

650 amino acids

Sequence
(BLAST)

001: MAGKVAYWFG QIGLQDVDLV EASFRIQKVN GRSFSFVGSE KGKTLTIRDQ KQHSVDKDKC TSPSISLATS SPVAWAMFRP LHPKHVYICF LISFAFFIDP
101: SSQHVDDVKK QQMREKVREM FYHAYDNYMT YAFPHDELKP ITKSFTDSLS ELGNLKLEHL PTDYNGSAVT LVESLSSLAI FGNKTEFEKG VLWLSENLKF
201: DVDVRVNLFE CNIRLLGGLI SAHLLAIDPT NRLIQGSYDN QLLRLAEDLG KRFLPAFETP TGIPYAWINF KKGVMENETT ETSTSGCGSL ILEMGALSRL
301: TGDPRFESAA LRTLRQLWRM RSSLDLLGTT LDVVTGEWLE YSSGIGAGVD SFYEYLMKAY ILFGKEDYWR MFRSAYLASQ KYFRYGPWYH EANMWSGKPT
401: YWQLTSLQAF WPGLQVLVGD VAAANSSHRE FFHAWEKFGV IPERYLLDHQ MIHPTERYYP LRPELAESTF YLYQATKDPW YLDVGEAMVK SLNRYTKVAG
501: GFASVRDVTT MQLEDHQHSF FLAETCKYLY LLFDDSFVAK RNYIFTTEGH PLQVMSSWHD KLPESYFSGN WTFSKSGAWE SGASAMSMKV CPSIAPNSRL
601: HEQHRESVCH VPDQKIDHKC WSNRDCGVDA TTCRQRSCSE VGFCGLWNPL

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.