CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 2
golgi 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90221	Canola	golgi	96.72	97.36
CDX99872	Canola	golgi, plastid	91.8	90.76
CDY26300	Canola	golgi	91.48	90.44
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	86.39	81.83
KRH11192	Soybean	endoplasmic reticulum	74.43	71.72
VIT_10s0003g03280.t01	Wine grape	cytosol	74.92	71.52
KRH21064	Soybean	endoplasmic reticulum	73.61	70.82
Solyc02g070520.2.1	Tomato	nucleus	71.48	69.32
GSMUA_Achr10P...	Banana	golgi	66.07	66.83
EES19212	Sorghum	plastid	66.72	63.4
Zm00001d010454_P001	Maize	plasma membrane	66.56	63.24
TraesCS1D01G127200.2	Wheat	plastid	65.57	62.21
Os05t0209100-01	Rice	cytosol, golgi, plastid	65.74	62.17
HORVU1Hr1G029490.1	Barley	plastid	65.41	62.05
TraesCS1A01G126300.2	Wheat	plastid	65.9	61.56
TraesCS1B01G145500.1	Wheat	plastid	64.75	61.43
GSMUA_Achr6P14460_001	Banana	cytosol	68.2	56.91
CDY22853	Canola	golgi, mitochondrion, plastid	33.77	36.72
CDX82213	Canola	golgi, mitochondrion	33.61	36.54
CDY46554	Canola	golgi, mitochondrion	33.44	36.43
CDY52948	Canola	golgi, mitochondrion	33.28	36.38
CDY55669	Canola	golgi, mitochondrion, plastid	33.44	36.36
CDY32409	Canola	golgi, mitochondrion	33.44	36.36
CDY50074	Canola	golgi, mitochondrion, plastid	33.61	35.59
CDY19581	Canola	golgi, mitochondrion, plastid	33.28	35.06
CDY68502	Canola	extracellular, golgi	16.56	28.53
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	21.15	22.59
CDX96894	Canola	extracellular, golgi	22.46	22.24
CDX84922	Canola	cytosol	21.31	20.0
CDY14886	Canola	golgi	5.74	17.59

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	GO:A0A078HBX2
UniProt:A0A078HBX2	EnsemblPlants:CDY35266	ProteinID:CDY35266	ProteinID:CDY35266.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00058194001	InterPro:Glyco_hydro_47
InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	SUPFAM:SSF48225
InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF1BB7	SEG:seg	:

Description

BnaC03g59570Dalpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:A0A078HBX2]

Coordinates

chrLK032349:+:69428..71821

Molecular Weight (calculated)

67724.4 Da

IEP (calculated)

8.257

GRAVY (calculated)

-0.254

Length

610 amino acids

Sequence
(BLAST)

001: MSKSLPYSVK DVNYDNAKFR HRSPLKVLSQ SLLTLNTKRD YASCSTGKFL ILILIFGIAC LMLMGTTKSP NDSPLNEKGK VTFVWGLRLG RLLRKPPRIP
101: PRLSPDEGQL KDNTTNGPKW AARQQSVKEA FDYAWSGYRK FAMGYDELMP ISQRGVDGLG GLGATVVDAL DTAMIMGHGN IVSEAGSWVE AHLLERISQK
201: GQVNLFETTI RVLGGLLSAY HLSGGDHGPK PDVYLNVAKD LADRLLSAFN SSPTAVPYSD VILRESTAHP APGGMSSTAE VASVQLEFNY LSAVSGDPKY
301: STEAMKVLAH IKTLPKTEGL VPIYISPHSG KFVGENIRLG SRGDSYYEYL IKVWLQQGGK MNGNFTYLHD MYTEAMKGVR HLLVRKSIPK GLVFVGELPY
401: GSKGEFSPKM DHLVCFLPGT LALGATKGLT KEKALAENLL SFEDLENLKL AEDLAKACFE MYEVTATGLA PEIAYFHTQE YSEDGLEGGN KSSVYAKDIV
501: IKQADRHNLL RPETVESLFV LYRITKDTKY REQGWQIFQA FEKHTKVKSG GYTSLDDVTE VPPHRRDKME TFFLGETLKY LYLLFGDDSV IPLDKFVFNT
601: EAHPLPIRNT

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.