Factsheet for Os05t0209100-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G127200.2	Wheat	plastid	86.51	86.78
HORVU1Hr1G029490.1	Barley	plastid	86.36	86.63
TraesCS1B01G145500.1	Wheat	plastid	85.89	86.16
Zm00001d010454_P001	Maize	plasma membrane	85.43	85.83
EES19212	Sorghum	plastid	85.27	85.67
TraesCS1A01G126300.2	Wheat	plastid	86.51	85.45
GSMUA_Achr10P...	Banana	golgi	66.05	70.65
KRH11192	Soybean	endoplasmic reticulum	66.2	67.46
Solyc02g070520.2.1	Tomato	nucleus	65.58	67.25
KRH21064	Soybean	endoplasmic reticulum	66.05	67.19
VIT_10s0003g03280.t01	Wine grape	cytosol	66.36	66.98
Bra010804.1-P	Field mustard	golgi	62.64	66.67
CDX90221	Canola	golgi	62.48	66.5
CDY35266	Canola	golgi	62.17	65.74
CDY26300	Canola	golgi	62.79	65.64
Bra032351.1-P	Field mustard	golgi	62.79	65.64
CDX99872	Canola	golgi, plastid	62.48	65.32
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	60.78	60.87
GSMUA_Achr6P14460_001	Banana	cytosol	68.37	60.33
Os04t0606400-01	Rice	golgi	31.94	36.01
Os02t0741300-01	Rice	mitochondrion	20.78	22.91
Os01t0773600-01	Rice	mitochondrion	22.48	21.2

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	EntrezGene:4338088	InterPro:6hp_glycosidase-like_sf
EMBL:AK069043	ProteinID:BAF16823.1	ProteinID:BAS92778.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006491	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47
InterPro:IPR012341	EnsemblPlantsGene:Os05g0209100	EnsemblPlants:Os05t0209100-01	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF55	UniProt:Q0DK00	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	UniParc:UPI0000E123A3	RefSeq:XP_015639934.1
SEG:seg	:	:	:	:	:

Description

Glycoside hydrolase, family 47 protein. (Os05t0209100-01)

Coordinates

chr5:-:6752222..6756320

Molecular Weight (calculated)

72098.4 Da

IEP (calculated)

8.071

GRAVY (calculated)

-0.344

Length

645 amino acids

Sequence
(BLAST)

001: MSGGGGGSGP LPYSMRDVDG RGAYNNAKFR HRSRLKMASQ ALFTNSSKYQ CGKFTVGKFL SLLMVSGVIY LLVHKSSDGF VSGELHEKVG NTHTKKDFPK
101: IRTFWRKPPR LPPRLPPNEI YRNNSLLLQS PQSEWTLRQK KVKEAFEHAW SGYRNYAMGY DELMPLTRRG IDGLGGLGAT VVDSLDTAII MGADDVVSEA
201: SKWIEDNLMK KLSEKGQVNL FETTIRVLGG LLSAYHLSGG DKARGDSGIP MTSKRANPER LLEVSKDLAD RLLLAFTSSP TAIPLSDVVL RDRTAHAAPD
301: GLSSTSEATT LQLEYSYLST ISGDPKYDLE AMKVLEHMRT LPTVEGLVPI YINPSSGQFS GENIRLGSRG DSYYEYLLKV WVQQERYRDT SLKYLFEMYT
401: EAMKGVKHLL VRKTIPNGLV FVGELPYGRN SGFSPKMDHL VCFLPGTLAL GATKGITKKK ALENHLLTAE DIDNLQLAED LAKTCVEMYF VTSTGLAPEI
501: AYFHIEGNSE GGPDGGNKSS QYVNDIIIKP LDRHNLLRPE TVESLFVLYR ITEDPKYREW GWQIFQAFEK YTRVDSGGYT SLDDVTSLPP PRRDKMETFF
601: LGETLKYLYL LFGESNILPL DKYVFNTEAH PLPIIQSAQQ ISHSV

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.