Factsheet for Bra032351.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26300	Canola	golgi	100.0	100.0
Bra010804.1-P	Field mustard	golgi	91.25	92.9
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	85.74	82.14
VIT_10s0003g03280.t01	Wine grape	cytosol	74.55	71.99
KRH11192	Soybean	endoplasmic reticulum	72.93	71.09
KRH21064	Soybean	endoplasmic reticulum	72.12	70.19
Solyc02g070520.2.1	Tomato	nucleus	70.5	69.16
GSMUA_Achr10P...	Banana	golgi	66.13	67.66
EES19212	Sorghum	plastid	65.96	63.4
Zm00001d010454_P001	Maize	plasma membrane	65.48	62.93
Os05t0209100-01	Rice	cytosol, golgi, plastid	65.64	62.79
TraesCS1D01G127200.2	Wheat	plastid	64.99	62.36
HORVU1Hr1G029490.1	Barley	plastid	64.99	62.36
TraesCS1A01G126300.2	Wheat	plastid	65.48	61.87
TraesCS1B01G145500.1	Wheat	plastid	64.34	61.74
GSMUA_Achr6P14460_001	Banana	cytosol	67.59	57.05
Bra001816.1-P	Field mustard	golgi, mitochondrion	33.87	36.6
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	33.23	36.54
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	33.87	36.1
Bra014291.1-P	Field mustard	mitochondrion	32.9	30.85
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	21.23	22.94
Bra035984.1-P	Field mustard	extracellular, golgi	19.77	20.89

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra032351
EnsemblPlants:Bra032351.1	EnsemblPlants:Bra032351.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M4EU69	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI00025425D4	SEG:seg	:	:	:	:

Description

AT1G30000 (E=7e-297) | glycoside hydrolase family 47 protein

Coordinates

chrA09:+:22340726..22343433

Molecular Weight (calculated)

68390.2 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.232

Length

617 amino acids

Sequence
(BLAST)

001: MSKSLPYSVK DVNYDNAKFR HRSPLKVLSQ SMLTLSTKRN YASCSTGKFL ILILIFGIGC LLLISKGPND SAPNEKGKVT FVGGLRLGKL LRKPPRLPPR
101: LSPDEGQLRA NGSNSDPKWA VRQQSVKDAF DFAWSGYRKY AMGYDELMPI SQRGVDGLGG LGATVVDALD TAMIMGHDHI VSEAGAWVEA HLLERISQKD
201: QVNLFETTIR VLGGLLSAYH LSGGDQGTVN MTHIGPKPDV YLNVAKDLAD RLLSAFSSSP TPIPYSDVIL RDSTAHPAPG GMSSTAEVAS VQLEFNYLSA
301: VSGDLKYSAE AMKVLAHIKT LPKTEGLVPI YISPQSGEFV GENIRLGSRG DSYYEYLIKV WLQQGGKLNS NFTYLHDMYT EAMKGVRHLL VRKSIPKGLV
401: FVGELPYGSK GEFSPKMDHL VCFLPGTLAL GATKGLTKEK ALAENLLSFE DLENLKLAEE LAKACFEMYE VTATGLAPEI AYFHTEEHSE DGLEGGNKSS
501: MYAKDIIIHQ ADRHNLLRPE TVESLFVLYR ITKDTKYRDQ GWQIFEAFEK YTKVKTGGYT SLDDVTEVPP RRRDKMETFF LGETLKYLYL LFGDDSVIPL
601: DKFVFNTEAH PLPIKHT

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.