Factsheet for Bra010804.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
golgi 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90221	Canola	golgi	98.84	98.84
Bra032351.1-P	Field mustard	golgi	92.9	91.25
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	87.13	81.99
VIT_10s0003g03280.t01	Wine grape	cytosol	76.57	72.61
KRH11192	Soybean	endoplasmic reticulum	75.58	72.35
KRH21064	Soybean	endoplasmic reticulum	74.92	71.61
Solyc02g070520.2.1	Tomato	nucleus	72.77	70.11
GSMUA_Achr10P...	Banana	golgi	67.66	67.99
EES19212	Sorghum	plastid	67.66	63.86
Zm00001d010454_P001	Maize	plasma membrane	67.16	63.4
Os05t0209100-01	Rice	cytosol, golgi, plastid	66.67	62.64
TraesCS1D01G127200.2	Wheat	plastid	66.17	62.36
HORVU1Hr1G029490.1	Barley	plastid	66.01	62.21
TraesCS1A01G126300.2	Wheat	plastid	66.67	61.87
TraesCS1B01G145500.1	Wheat	plastid	65.35	61.59
GSMUA_Achr6P14460_001	Banana	cytosol	69.64	57.73
Bra001816.1-P	Field mustard	golgi, mitochondrion	34.65	36.78
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	33.83	36.54
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	33.83	35.41
Bra014291.1-P	Field mustard	mitochondrion	33.66	31.0
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	21.29	22.59
Bra035984.1-P	Field mustard	extracellular, golgi	19.97	20.72

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra010804
EnsemblPlants:Bra010804.1	EnsemblPlants:Bra010804.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M4D2V1	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI00025470D2	SEG:seg	:	:	:	:

Description

AT1G30000 (E=3e-303) | glycoside hydrolase family 47 protein

Coordinates

chrA08:+:16541472..16543862

Molecular Weight (calculated)

67154.7 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.233

Length

606 amino acids

Sequence
(BLAST)

001: MSKSLPYSVK DVHYDNAKFR HRSPLKVLSQ SLLTLNTKRD YASCSTGKFL ILILIFGIAC LMLMGTNDSP LNEKGKVTFV GGLRLGRLLR KPPRLPPRLS
101: PDEGQLKGNT TNSPKWAARQ QSVKEAFDYA WSGYRKYAMG YDELMPISQR GVDGLGGLGA TVVDALDTAM IMGHGNIVSE AGSWVEAHLL ERISQKGQVN
201: LFETTIRVLG GLLSAYHLSG GDHGPKPDVY LNVAKDLADR LLSAFNSSPT AVPYSDVILR ESTAHPAPGG MSSTAEVASV QLEFNYLSAV SGDPKYSAEA
301: MKVLAHIKTL PKTEGLVPIY ISPHSGEFVG ENIRLGSRGD SYYEYLIKVW LQQGGKLNGN FTYLHDMYTE AMKGVRHLLV RKSIPKGLVF VGELPYGSKG
401: EFSPKMDHLV CFLPGTLALG ATKGLTKEKA LAENLLSFED LENLKLAEDL AKACFEMYEV TATGLAPEIA YFHTEEYSED GLEGGNKSSA YAKDIIIKHA
501: DRHNLLRPET VESLFVLYRI TKDTKYREQG WQIFEAFEKH TKVKSGGYTS LDDVTEVPPH RRDKMETFFL GETLKYLYLL FGDDSVIPLD KFVFNTEAHP
601: LPIRNI

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.