CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
golgi 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010454_P001	Maize	plasma membrane	96.88	96.88
Os05t0209100-01	Rice	cytosol, golgi, plastid	85.67	85.27
TraesCS1D01G127200.2	Wheat	plastid	83.8	83.67
HORVU1Hr1G029490.1	Barley	plastid	83.49	83.36
TraesCS1B01G145500.1	Wheat	plastid	83.18	83.05
TraesCS1A01G126300.2	Wheat	plastid	83.8	82.39
GSMUA_Achr10P...	Banana	golgi	66.67	70.98
VIT_10s0003g03280.t01	Wine grape	cytosol	68.38	68.7
Solyc02g070520.2.1	Tomato	nucleus	66.51	67.89
Bra010804.1-P	Field mustard	golgi	63.86	67.66
CDX90221	Canola	golgi	63.71	67.49
KRH11192	Soybean	endoplasmic reticulum	65.89	66.82
CDY35266	Canola	golgi	63.4	66.72
KRH21064	Soybean	endoplasmic reticulum	65.89	66.72
Bra032351.1-P	Field mustard	golgi	63.4	65.96
CDY26300	Canola	golgi	63.4	65.96
CDX99872	Canola	golgi, plastid	63.08	65.64
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	61.84	61.65
GSMUA_Achr6P14460_001	Banana	cytosol	68.85	60.47
EES12812	Sorghum	golgi, mitochondrion, plastid	32.09	36.52
EES05547	Sorghum	endoplasmic reticulum, golgi	20.87	23.14
KXG33484	Sorghum	golgi	22.43	21.82

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	EntrezGene:8055739
UniProt:C5YUN6	EnsemblPlants:EES19212	ProteinID:EES19212	ProteinID:EES19212.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006491	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0019538
InterPro:Glyco_hydro_47	InterPro:IPR012341	ProteinID:OQU77609.1	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742
PANTHER:PTHR11742:SF55	EnsemblPlantsGene:SORBI_3009G077600	SUPFAM:SSF48225	unigene:Sbi.8303	InterPro:Seven-hairpin_glycosidases	UniParc:UPI0001A8874E
RefSeq:XP_002440782.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:10353164..10358755

Molecular Weight (calculated)

71703.6 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.386

Length

642 amino acids

Sequence
(BLAST)

001: MSGTSGPLPY SMRDVGAGGA YNNAKFRHRS RLKIVLQSLA TNSSKYRCGK FTVGKFLSLL MVSGLLYLFL HKGSEGIVSS ELHGKEVQNK NVRRAPNIRR
101: FWRKPPRLPP RLPPNEIYKN NSLLQQSPSE WTSRQKKVKE AFEHAWSGYQ KYAMGYDELM PLSHRGTDGL GGLGATIVDS LDTAIIMGAD DVVSEASKWI
201: EDNLMQRISE KGQVNLFETT IRVLGGLLSA YHLSGGHHPG AGDSGVPVTY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDH TAHAAPDGLS
301: STSEASTLQL EFSYLSKVSG DPKYDREAMK VLEHMHTLPK VEGLVPIYIN PSSGQFSGEN IRLGSRGDSY YEYLLKVWVQ QEEYRDSSLK YLFEMYTEAM
401: RGVKHLLVRK TVPNGLVFVG ELPSGQNGGF SPKMDHLVCF LPGTLALGAT KGITKRKALE SNLLTDEDKE NLQLAEDLAK TCVEMYFVTS TGLAPEIAYF
501: HIEGDTEGGP DGGNKSSKYI NDIIIKPLDR HNLLRPETVE SLFVLYRITE DPKYREWGWQ IFQAFEKYTK VDSGGYTSLD DVTSLPPSTR DKMETFFLGE
601: TLKYLYLLFD ENNTLPLDKY VFNTEAHPLP VMRSAERASH SV

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.