Factsheet for AT1G30000.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

nucleus 1
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010804.1-P	Field mustard	golgi	81.99	87.13
CDX90221	Canola	golgi	81.68	86.8
CDY35266	Canola	golgi	81.83	86.39
Bra032351.1-P	Field mustard	golgi	82.14	85.74
CDY26300	Canola	golgi	82.14	85.74
CDX99872	Canola	golgi, plastid	81.99	85.58
KRH11192	Soybean	endoplasmic reticulum	69.1	70.3
VIT_10s0003g03280.t01	Wine grape	cytosol	69.57	70.11
KRH21064	Soybean	endoplasmic reticulum	68.17	69.24
Solyc02g070520.2.1	Tomato	nucleus	66.15	67.73
GSMUA_Achr10P...	Banana	golgi	61.96	66.17
EES19212	Sorghum	plastid	61.65	61.84
Zm00001d010454_P001	Maize	plasma membrane	61.02	61.22
Os05t0209100-01	Rice	cytosol, golgi, plastid	60.87	60.78
HORVU1Hr1G029490.1	Barley	plastid	60.25	60.34
TraesCS1D01G127200.2	Wheat	plastid	60.25	60.34
TraesCS1A01G126300.2	Wheat	plastid	60.71	59.88
TraesCS1B01G145500.1	Wheat	plastid	59.78	59.88
GSMUA_Achr6P14460_001	Banana	cytosol	62.42	54.99
AT1G51590.1	Thale cress	golgi, mitochondrion	32.45	37.32
AT3G21160.1	Thale cress	golgi	33.07	37.24
AT1G27520.1	Thale cress	golgi	20.5	23.0
AT5G43710.1	Thale cress	endoplasmic reticulum	21.74	22.44

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	EntrezGene:839879
UniProt:A0A1P8AM79	ProteinID:ANM57755.1	ArrayExpress:AT1G30000	EnsemblPlantsGene:AT1G30000	RefSeq:AT1G30000	TAIR:AT1G30000
RefSeq:AT1G30000-TAIR-G	EnsemblPlants:AT1G30000.2	Unigene:At.26476	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	Symbol:MNS3	RefSeq:NP_001320239.1
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
SignalP:SignalP-noTM	UniParc:UPI000848DDBE	SEG:seg	:	:	:

Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]

Coordinates

chr1:-:10509156..10512558

Molecular Weight (calculated)

71074.6 Da

IEP (calculated)

6.171

GRAVY (calculated)

-0.098

Length

644 amino acids

Sequence
(BLAST)

001: MGYAQVFSFI MDLMSLVLVS GSSSLVLDEL LCVQIDLGFT KLRFCEVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT
101: FVGGLRLGGL LRKPPRLPPR LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI
201: MGLDNIVSEA GSWVETHLLE RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST
301: AHPAPGGASS TAEVASVQLE FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY
401: LHDMYIEAMK GVRHLLVQNS IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT
501: GLAPEIAYFH TKDYTEDGLD GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD
601: KMETFFLGET LKYLYLLFGD DSVIPLDKFV FNTEAHPLPI RRNT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.