CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	golgi, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26300	Canola	golgi	97.57	97.57
CDX90221	Canola	golgi	90.6	92.24
CDY35266	Canola	golgi	90.76	91.8
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	85.58	81.99
VIT_10s0003g03280.t01	Wine grape	cytosol	74.39	71.83
KRH11192	Soybean	endoplasmic reticulum	72.61	70.77
KRH21064	Soybean	endoplasmic reticulum	71.8	69.87
Solyc02g070520.2.1	Tomato	nucleus	70.18	68.84
GSMUA_Achr10P...	Banana	golgi	65.96	67.5
EES19212	Sorghum	plastid	65.64	63.08
Zm00001d010454_P001	Maize	plasma membrane	65.15	62.62
Os05t0209100-01	Rice	cytosol, golgi, plastid	65.32	62.48
TraesCS1D01G127200.2	Wheat	plastid	64.51	61.9
HORVU1Hr1G029490.1	Barley	plastid	64.51	61.9
TraesCS1A01G126300.2	Wheat	plastid	64.99	61.41
TraesCS1B01G145500.1	Wheat	plastid	63.86	61.28
GSMUA_Achr6P14460_001	Banana	cytosol	67.26	56.77
CDY32409	Canola	golgi, mitochondrion	33.87	37.25
CDX82213	Canola	golgi, mitochondrion	33.71	37.08
CDY22853	Canola	golgi, mitochondrion, plastid	33.55	36.9
CDY55669	Canola	golgi, mitochondrion, plastid	33.39	36.72
CDY50074	Canola	golgi, mitochondrion, plastid	34.2	36.63
CDY46554	Canola	golgi, mitochondrion	33.06	36.43
CDY52948	Canola	golgi, mitochondrion	32.9	36.38
CDY19581	Canola	golgi, mitochondrion, plastid	33.87	36.1
CDY68502	Canola	extracellular, golgi	16.05	27.97
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	21.23	22.94
CDX96894	Canola	extracellular, golgi	22.04	22.08
CDX84922	Canola	cytosol	21.39	20.31
CDY14886	Canola	golgi	5.67	17.59

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	GO:A0A078EFL9
EnsemblPlants:CDX99872	ProteinID:CDX99872	ProteinID:CDX99872.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00108600001
InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EC1632	SEG:seg

Description

BnaC05g22940D

Coordinates

chrLK031914:-:700326..703220

Molecular Weight (calculated)

68354.1 Da

IEP (calculated)

7.277

GRAVY (calculated)

-0.241

Length

617 amino acids

Sequence
(BLAST)

001: MSKSLPYSVK DVNYDNAKFR HRSPLKVLSQ SMLTLSTKRN YASCSTGKFL MLILIFGIGC LLLISKGPND SAPNEKGKVT FVGGLRLGKL LRKPPRLPPR
101: LSPDEGQLRA NGSNSDPKWA ARQQSVKDAF DYAWSGYRKY AMGYDELMPI SQRGVDGLGG LGATVVDALD TAMIMGHDHI VSEAGAWVEA HLLERISQKD
201: QVNLFETTIR VLGGLLSAYH LSGGDNSTMN MTHNGPKPAV YLNVAKDLAD RLLSAFSSSP TPVPYSDVIL RDSTAHPAPG GMSSTAEVAS VQLEFNYLSA
301: VSGDPKYSTE AMKVLAHIKT LPKTEGLVPI YISPQSGEFV GENIRLGSRG DSYYEYLIKV WLQQGGKLNS NFTYLHDMYT VAMKGVRHLL VRKSIPKGLV
401: FVGELPYGSK GEFSPKMDHL VCFLPGTLAL GATKGLTKEK ALAENLLSFE DLENLKLAEE LAKACFEMYE VTATGLAPEI AYFHTEEYSE DGLEGGNKSS
501: MYAKDIIIHQ ADRHNLLRPE TVESLFVLYR LTKDTKYRDQ GWQIFEAFEK YTKVKTGGYT SLDDVTEVPP LRRDKMETFF LGETLKYLYL LFGDDSVIPL
601: DKFVFNTEAH PLPIKHT

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.