CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010804.1-P	Field mustard	golgi	98.84	98.84
CDY35266	Canola	golgi	97.36	96.72
CDY26300	Canola	golgi	92.41	90.76
CDX99872	Canola	golgi, plastid	92.24	90.6
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	86.8	81.68
VIT_10s0003g03280.t01	Wine grape	cytosol	76.24	72.3
KRH11192	Soybean	endoplasmic reticulum	75.41	72.2
KRH21064	Soybean	endoplasmic reticulum	74.59	71.29
Solyc02g070520.2.1	Tomato	nucleus	72.44	69.79
GSMUA_Achr10P...	Banana	golgi	67.33	67.66
EES19212	Sorghum	plastid	67.49	63.71
Zm00001d010454_P001	Maize	plasma membrane	67.0	63.24
Os05t0209100-01	Rice	cytosol, golgi, plastid	66.5	62.48
TraesCS1D01G127200.2	Wheat	plastid	66.01	62.21
HORVU1Hr1G029490.1	Barley	plastid	65.84	62.05
TraesCS1A01G126300.2	Wheat	plastid	66.5	61.72
TraesCS1B01G145500.1	Wheat	plastid	65.18	61.43
GSMUA_Achr6P14460_001	Banana	cytosol	69.31	57.46
CDY32409	Canola	golgi, mitochondrion	33.99	36.72
CDX82213	Canola	golgi, mitochondrion	33.83	36.54
CDY22853	Canola	golgi, mitochondrion, plastid	33.83	36.54
CDY46554	Canola	golgi, mitochondrion	33.5	36.25
CDY52948	Canola	golgi, mitochondrion	33.33	36.2
CDY55669	Canola	golgi, mitochondrion, plastid	33.5	36.19
CDY50074	Canola	golgi, mitochondrion, plastid	33.83	35.59
CDY19581	Canola	golgi, mitochondrion, plastid	33.5	35.06
CDY68502	Canola	extracellular, golgi	16.5	28.25
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	21.12	22.42
CDX96894	Canola	extracellular, golgi	22.44	22.08
CDX84922	Canola	cytosol	21.29	19.85
CDY14886	Canola	golgi	5.78	17.59

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	GO:A0A078DLS2
EnsemblPlants:CDX90221	ProteinID:CDX90221	ProteinID:CDX90221.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00150782001
InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF2836	SEG:seg

Description

BnaA08g17630D

Coordinates

chrLK031862:-:704181..706965

Molecular Weight (calculated)

67166.8 Da

IEP (calculated)

7.757

GRAVY (calculated)

-0.230

Length

606 amino acids

Sequence
(BLAST)

001: MSKSLPYSVK DVNYDNAKFR HRSPLKVLSQ SLLTFNTKRD YTSCSTGKFL ILILIFGIAC LMLMGTNDSP LNEKGKVTFV GGLRLGRLLR KPPRLPPRLS
101: PDEGQLKGNT TNGPKWAARQ QSVKEAFDYA WSGYRKYAMG YDELMPISQR GVDGLGGLGA TVVDALDTAM IMGHGNIVSE AGSWVEAHLL ERISQKGQVN
201: LFETTIRVLG GLLSAYHLSG GDHGPKPDVY LNVAKDLADR LLSAFNSSPT AVPYSDVILR ESTAHPAPGG MSSTAEVASV QLEFNYLSAV SGDAKYSAEA
301: MKVLAHIKTL PKTEGLVPIY ISPHSGEFVG ENIRLGSRGD SYYEYLIKVW LQQGGKLNGN FTYLHDMYTE AMKGVRHLLV RKSIPKGLVF VGELPYGSKG
401: EFSPKMDHLV CFLPGTLALG ATKGLTKEKA LAENLLSFED LENLKLAEDL AKACFEMYEV TATGLAPEIA YFHTEKYSED GLEGGNKSSV YAKDIIIKHA
501: DRHNLLRPET VESLFVLYRI TKDTKYREQG WQIFEAFEKH TKVKSGGYTS LDDVTEVPPH RRDKMETFFL GETLKYLYLL FGDDSVIPLD KFVFNTEAHP
601: LPIRNI

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.