CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035984.1-P	Field mustard	extracellular, golgi	97.46	59.08
CDX96894	Canola	extracellular, golgi	96.89	55.68
AT5G43710.1	Thale cress	endoplasmic reticulum	89.83	50.96
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	78.53	44.91
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	77.97	44.66
Zm00001d012643_P007	Maize	golgi	77.4	42.09
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	79.66	41.35
KXG33484	Sorghum	golgi	75.99	40.76
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	76.84	40.66
TraesCS3A01G322000.1	Wheat	golgi	76.84	40.66
Os01t0773600-01	Rice	mitochondrion	77.97	40.35
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	76.84	40.18
HORVU3Hr1G075850.2	Barley	plastid	77.68	39.51
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	73.16	37.54
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	45.76	28.37
CDX84922	Canola	cytosol	46.33	25.23
CDY52948	Canola	golgi, mitochondrion	29.94	19.0
CDY46554	Canola	golgi, mitochondrion	29.94	18.93
CDY55669	Canola	golgi, mitochondrion, plastid	29.66	18.72
CDX82213	Canola	golgi, mitochondrion	29.38	18.54
CDY22853	Canola	golgi, mitochondrion, plastid	29.1	18.36
CDY32409	Canola	golgi, mitochondrion	28.53	18.0
CDY50074	Canola	golgi, mitochondrion, plastid	29.1	17.88
CDY19581	Canola	golgi, mitochondrion, plastid	29.1	17.79
CDY35266	Canola	golgi	28.53	16.56
CDY26300	Canola	golgi	28.81	16.53
CDX90221	Canola	golgi	28.25	16.5
CDX99872	Canola	golgi, plastid	27.97	16.05
PGSC0003DMT400041971	Potato	extracellular, golgi	12.99	14.7
CDY14886	Canola	golgi	7.34	13.07

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:A0A078JSV6
UniProt:A0A078JSV6	EnsemblPlants:CDY68502	ProteinID:CDY68502	ProteinID:CDY68502.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00074828001	InterPro:Glyco_hydro_47	InterPro:IPR012341
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
SignalP:SignalP-noTM	UniPathway:UPA00378	UniParc:UPI0004EE13B0	:	:	:

Description

BnaAnng27500Dalpha-1,2-Mannosidase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSV6]

Coordinates

chrLK037435:-:2..2489

Molecular Weight (calculated)

39570.1 Da

IEP (calculated)

4.689

GRAVY (calculated)

0.010

Length

354 amino acids

Sequence
(BLAST)

001: MESNKLRWGL CYAIFISLTL SSLVRDLGVS AEGVNPREAK QLRDEVREMF YHAFDGYMNN AFPLDELRPL SCQGEDTLGG YALTLIDSLD TLALLGDRER
101: FTSSVQWIGK NLQFNINKTV SVFETTIRVL GGLLSAHLIA SDYATGMRIP SYDNELLVLA EDLARRMLPA FDTPTGIPYG SVNLMYGITS TAGGGTLTLE
201: FGVLSRLTND PVFEQVAKNA VRGLWARRST LDLVGAHINV FTGEWTQKDA GIGTSIDSFY EYLLKAYILF GDEEYLYIFQ EAYGSAMHHL HKDPWYVEVN
301: MDSGAIVWPV FNSLQAFWPG LQVLAGDVDP AIRTHTAFFS VWKRYGFTPE GFNL

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.