Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 6
- extracellular 5
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68502 | Canola | extracellular, golgi | 50.96 | 89.83 |
| CDX96894 | Canola | extracellular, golgi | 83.97 | 85.06 |
| Bra035984.1-P | Field mustard | extracellular, golgi | 78.53 | 83.9 |
| KRH34374 | Soybean | endoplasmic reticulum, golgi, vacuole | 68.59 | 69.14 |
| Solyc06g053860.2.1 | Tomato | endoplasmic reticulum, golgi | 66.67 | 67.31 |
| VIT_05s0020g04650.t01 | Wine grape | endoplasmic reticulum | 69.87 | 63.93 |
| Zm00001d012643_P007 | Maize | golgi | 65.71 | 62.98 |
| KXG33484 | Sorghum | golgi | 64.9 | 61.36 |
| TraesCS3A01G322000.1 | Wheat | golgi | 65.22 | 60.84 |
| TraesCS3D01G309300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 64.74 | 60.39 |
| TraesCS3B01G344300.2 | Wheat | golgi, mitochondrion | 65.22 | 60.12 |
| Os01t0773600-01 | Rice | mitochondrion | 65.71 | 59.94 |
| PGSC0003DMT400041971 | Potato | extracellular, golgi | 29.17 | 58.15 |
| HORVU3Hr1G075850.2 | Barley | plastid | 63.94 | 57.33 |
| GSMUA_Achr4P21040_001 | Banana | extracellular, golgi | 62.66 | 56.67 |
| AT1G27520.1 | Thale cress | golgi | 36.54 | 39.72 |
| AT1G51590.1 | Thale cress | golgi, mitochondrion | 22.28 | 24.82 |
| AT3G21160.1 | Thale cress | golgi | 22.12 | 24.13 |
| AT1G30000.2 | Thale cress | extracellular, golgi, plasma membrane | 22.44 | 21.74 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:19.1.1.1.4 | InterPro:6hp_glycosidase-like_sf | EntrezGene:834391 |
| ProteinID:AED94999.1 | EMBL:AF370128 | ArrayExpress:AT5G43710 | EnsemblPlantsGene:AT5G43710 | RefSeq:AT5G43710 | TAIR:AT5G43710 |
| RefSeq:AT5G43710-TAIR-G | EnsemblPlants:AT5G43710.1 | TAIR:AT5G43710.1 | EMBL:AY040044 | Unigene:At.23954 | ProteinID:BAB11298.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004559 | GO:GO:0004571 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0006491 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0019538 | GO:GO:0030433 | GO:GO:0046872 | InterPro:Glyco_hydro_47 |
| InterPro:IPR012341 | RefSeq:NP_199184.1 | PFAM:PF01532 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00747 | PANTHER:PTHR11742 | PANTHER:PTHR11742:SF41 | UniProt:Q9FG93 |
| SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000009CDBB | SEG:seg |
Description
MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
Coordinates
chr5:-:17552130..17556730
Molecular Weight (calculated)
70099.5 Da
IEP (calculated)
4.557
GRAVY (calculated)
-0.235
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.