CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68502	Canola	extracellular, golgi	44.91	78.53
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	68.98	69.09
AT5G43710.1	Thale cress	endoplasmic reticulum	69.14	68.59
CDX96894	Canola	extracellular, golgi	65.75	66.07
Bra035984.1-P	Field mustard	extracellular, golgi	61.07	64.73
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	70.92	64.37
PGSC0003DMT400041971	Potato	extracellular, golgi	31.66	62.62
Zm00001d012643_P007	Maize	golgi	64.94	61.75
TraesCS3A01G322000.1	Wheat	golgi	65.59	60.69
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	65.43	60.54
Os01t0773600-01	Rice	mitochondrion	66.72	60.38
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	65.59	59.97
KXG33484	Sorghum	golgi	63.81	59.85
HORVU3Hr1G075850.2	Barley	plastid	66.56	59.2
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	64.62	57.97
KRH57025	Soybean	extracellular	13.25	40.39
KRH03356	Soybean	endoplasmic reticulum, golgi	35.7	38.64
KRH19110	Soybean	cytosol	15.83	26.2
KRH47289	Soybean	endoplasmic reticulum	23.26	25.0
KRH44626	Soybean	mitochondrion	22.78	24.39
KRH02771	Soybean	golgi, plastid	22.46	23.92
KRH11192	Soybean	endoplasmic reticulum	23.42	22.91
KRH21064	Soybean	endoplasmic reticulum	23.42	22.87
KRH58075	Soybean	extracellular	2.91	19.15

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	EntrezGene:100785235	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf
EMBL:ACUP02006591	EnsemblPlantsGene:GLYMA_10G179900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47	UniProt:I1LC43	InterPro:IPR012341	EnsemblPlants:KRH34374
ProteinID:KRH34374	ProteinID:KRH34374.1	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233D0D2	:

Description

hypothetical protein

Coordinates

chr10:+:41319638..41328341

Molecular Weight (calculated)

69652.0 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.257

Length

619 amino acids

Sequence
(BLAST)

001: MEGIIQIRSV LLLLSITMAS LTLAVADGVS REEAKELRDE VKDMFYHAFN GYMDHAFPLD ELRPLSCAGH DTLGGYALTL IDSLDTLALL GDRQRFSASV
101: EWIGKNLRFD INKTVSLFET TIRVLGGLLS AHLIATDYAT GMRVPLYDNQ LLNLAEDLAR RLLPAFDTPT GIPFGSVNLL HGVDKHESKI TSTAGGGTLT
201: LEFGVLSRLT NDPIFEQVTK NAVRGLWARR SKLNLVGAHI NVFTGEWTQK DAGIGTSIDS FYEYLLKAYL LFGDEEYLYI FQEAYAAAMH YLYHDPWYVE
301: VNMDSAAIVW PLFNSLQAFW PGLQVLAGDI NPAIRTHAAF LSVWRRYGFT PEGFNLASLS VQHGQKSYPL RPELIESTYW LYKATRDPRY LDAGRDMVAS
401: LQYGTRCPCG YCHISDVENH QQEDHMESFF LAETVKYLWL LFDLAVGPDN LVENGPYKYI FSTEGHLLPA TPQISLVREH CLYYGAYCRS GDLRQTYFVP
501: ESDKDKKESN DTGFYESWTK PTYSSDYTTV EPSAVSGLIK GFCPGLNHGQ KFGILYAYPT DERHDYETNQ VQQKESTTAV QLQSHSVLVL RDQSSDNLLP
601: EDNSSNHNDS QTNESSDTP

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.