CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRH34983
KRH34984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	KRG91803	AT4G09570.1	19130088
AT3G21160.1	KRH34983	AT4G09570.1	19130088
AT3G21160.1	KRH34984	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58075	Soybean	extracellular	18.72	74.47
KRH02771	Soybean	golgi, plastid	86.9	55.94
Zm00001d019006_P001	Maize	cytosol	29.95	50.0
GSMUA_Achr4P12680_001	Banana	golgi	60.43	49.02
CDY46554	Canola	golgi, mitochondrion	66.58	44.46
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	66.58	44.38
CDY22853	Canola	golgi, mitochondrion, plastid	66.58	44.38
CDY55669	Canola	golgi, mitochondrion, plastid	66.58	44.38
AT1G51590.1	Thale cress	golgi, mitochondrion	66.04	44.11
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	68.45	44.06
CDY52948	Canola	golgi, mitochondrion	65.24	43.73
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	57.75	43.03
EES12812	Sorghum	golgi, mitochondrion, plastid	64.71	42.91
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	64.71	42.83
KRH47289	Soybean	endoplasmic reticulum	65.78	42.71
Zm00001d026257_P003	Maize	golgi, mitochondrion	64.17	42.55
AT3G21160.1	Thale cress	golgi	64.97	42.48
KRH44626	Soybean	mitochondrion	65.51	42.39
Os04t0606400-01	Rice	golgi	64.44	42.13
CDX82213	Canola	golgi, mitochondrion	62.3	41.53
CDY50074	Canola	golgi, mitochondrion, plastid	63.9	41.49
CDY32409	Canola	golgi, mitochondrion	61.76	41.18
Bra001816.1-P	Field mustard	golgi, mitochondrion	62.83	41.16
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	63.64	41.11
CDY19581	Canola	golgi, mitochondrion, plastid	63.64	41.11
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	62.57	39.07
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	62.57	39.07
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	62.03	38.73
TraesCS2D01G430000.2	Wheat	golgi	62.03	38.73
Bra014291.1-P	Field mustard	mitochondrion	66.04	37.54
Zm00001d003736_P001	Maize	plastid	39.84	34.89
Zm00001d031739_P001	Maize	cytosol	10.16	31.67
Zm00001d025428_P002	Maize	cytosol	8.82	29.46
KRH21064	Soybean	endoplasmic reticulum	39.3	23.19
KRH11192	Soybean	endoplasmic reticulum	38.24	22.59
KRH03356	Soybean	endoplasmic reticulum, golgi	29.14	19.06
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	26.2	15.83
KRH57025	Soybean	extracellular	8.02	14.78

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	UniProt:A0A0R0GKX7
EMBL:ACUP02008170	EnsemblPlantsGene:GLYMA_13G101200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	EnsemblPlants:KRH19110	ProteinID:KRH19110	ProteinID:KRH19110.1
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
UniParc:UPI0006EE18AE	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:21634819..21639129

Molecular Weight (calculated)

42789.0 Da

IEP (calculated)

5.775

GRAVY (calculated)

-0.344

Length

374 amino acids

Sequence
(BLAST)

001: MGATLVDSLD TLFIMGLDVQ FKRATEVLGG LLNAYDLCGE KPAWNTPSGI PYNRINLAYG NTNNPTWARE NSILVDSGSE QLEFIALSQR TNDPKYKEKA
101: EKRMLLPINI NPLTGTKSSG AATFGAMDDS FYEYLLKAWI HGNKTEVVTF YREMWEKSMK GLQSLIWRST PSFTCLMDEL ACFVPGMLAL GSSNYGLGEA
201: EKFMALAEEL AWTCYNFYQL TPTKLAGESY YFSNGQSNPP RCYVLRLRKL PETIESLFYL WCFTGNKTYR EWGWNIFQAF ENKSRIETGY VGLKDVNTGA
301: KDNMMQSYFL SETLKYLYLL FSPPSVISLN EWVFNTEAHI LRIMTRSAHE ESGEQEEVFP RHLHGRKEGR IDYK

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.