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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plastid
Any Predictor:golgi, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004812_P002
Zm00001d023560_P002
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21160.1 Zm00001d004812_P002 AT4G09570.1 19130088
AT3G21160.1 Zm00001d023560_P002 AT4G09570.1 19130088
AT3G21160.1 Zm00001d053016_P002 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES12812 Sorghum golgi, mitochondrion, plastid 96.28 96.45
Zm00001d026257_P003 Maize golgi, mitochondrion 95.58 95.74
Os04t0606400-01 Rice golgi 88.32 87.24
Zm00001d019006_P001 Maize cytosol 33.27 83.93
TraesCS2A01G432100.2 Wheat golgi, mitochondrion, plastid 85.13 80.3
HORVU2Hr1G100750.2 Barley golgi, mitochondrion, plastid 85.13 80.3
TraesCS2D01G430000.2 Wheat golgi 84.78 79.97
TraesCS2B01G453500.2 Wheat golgi, mitochondrion, plastid 84.6 79.8
Zm00001d031739_P001 Maize cytosol 16.11 75.83
GSMUA_Achr2P04510_001 Banana golgi, mitochondrion 77.88 75.73
KRH58075 Soybean extracellular 12.21 73.4
Zm00001d025428_P002 Maize cytosol 14.51 73.21
AT1G51590.1 Thale cress golgi, mitochondrion 71.15 71.79
Bra018917.1-P Field mustard golgi, mitochondrion, plastid 70.97 71.48
CDY55669 Canola golgi, mitochondrion, plastid 70.97 71.48
CDY22853 Canola golgi, mitochondrion, plastid 70.97 71.48
GSMUA_Achr4P12680_001 Banana golgi 57.88 70.93
CDY46554 Canola golgi, mitochondrion 70.09 70.71
CDY52948 Canola golgi, mitochondrion 69.2 70.07
CDX82213 Canola golgi, mitochondrion 67.08 67.56
CDY32409 Canola golgi, mitochondrion 66.55 67.02
AT3G21160.1 Thale cress golgi 67.79 66.96
Bra031256.1-P Field mustard golgi, mitochondrion, plastid 68.32 66.67
CDY50074 Canola golgi, mitochondrion, plastid 67.96 66.67
Bra001816.1-P Field mustard golgi, mitochondrion 66.9 66.2
CDY19581 Canola golgi, mitochondrion, plastid 67.43 65.8
KRH19110 Soybean cytosol 42.83 64.71
VIT_11s0052g00140.t01 Wine grape golgi, mitochondrion 57.17 64.34
KRH02771 Soybean golgi, plastid 63.72 61.96
Bra014291.1-P Field mustard mitochondrion 71.15 61.09
Zm00001d003736_P001 Maize plastid 41.95 55.5
Zm00001d010454_P001 Maize plasma membrane 35.93 31.62
Zm00001d017997_P010 Maize golgi 24.25 23.38
Zm00001d012643_P007 Maize golgi 25.13 21.81
Protein Annotations
KEGG:00510+3.2.1.113KEGG:00513+3.2.1.113Gene3D:1.50.10.10EntrezGene:100502479MapMan:18.1.1.6.3InterPro:6hp_glycosidase-like_sf
EMBL:BT067876EMBL:BT088317UniProt:C0PHV7ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004571GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_47InterPro:IPR012341ProteinID:ONM14138.1
ProteinID:ONM14139.1PFAM:PF01532PRINTS:PR00747PANTHER:PTHR11742PANTHER:PTHR11742:SF42SUPFAM:SSF48225
InterPro:Seven-hairpin_glycosidasesTMHMM:TMhelixUniParc:UPI000195CF35EnsemblPlantsGene:Zm00001d002388EnsemblPlants:Zm00001d002388_P003EnsemblPlants:Zm00001d002388_T003
SEG:seg:::::
Description
Mannosyl-oligosaccharide 12-alpha-mannosidase MNS1
Coordinates
chr2:-:11653880..11664164
Molecular Weight (calculated)
64272.8 Da
IEP (calculated)
5.916
GRAVY (calculated)
-0.486
Length
565 amino acids
Sequence
(BLAST)
001: MARRSSSSSS GTWRYLNPAY YLKRPKRLAL LFFVFVAATF AFWDRQSLVS EYESEISRLE DDINRLHDQL RKAGVNLDEN PVVSNKNSRK DLVVEIDPVN
101: NERREKVKEA MLHAWNSYVK YAWGMDELQP QSKNGINSFG GLGATLVDSL DTLYIMGLKD EFQKARDWVA ESLDFDKDYD ASVFETTIRV VGGLLSSYDL
201: SGDKVFLDKA KDITDRLLPA WDTTSGIPYN RINLAHGRAH NPGWTNGDSI LADSGTEQLE FIALSQRTGD PKYQQKAENV IKQLQKIYPS DGLLPIYINP
301: HSGTASYSTI TFGAMGDSFY EYLLKVWIQG NKTEHVKHYR QMWETSMEGL LSLTKKTTPS NYYYICEKNG GSLSDKMDEL ACFAPGMLAL GASGYGPEKS
401: EQIMNLAKEL ARTCYNFYQT TPTKLAGENY FFHTGQDMGV GTSWNILRPE TVESLMYLWR LTGNKTYQDW GWDIFQAFEK NSRIESGYVG LRDVNTGEKD
501: NMMQSFFLAE TLKYLYLLFS PPSVISFDEW VFNTEAHPLR IVPVSDNKGI GTPVRQFGRK QGKPE
Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)
001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV
Arabidopsis Description
MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.