Factsheet for Zm00001d003736_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d023560_P002
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT3G21160.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT3G21160.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019006_P001	Maize	cytosol	39.58	75.45
KRH58075	Soybean	extracellular	11.94	54.26
Zm00001d026257_P003	Maize	golgi, mitochondrion	56.67	42.91
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	55.5	41.95
GSMUA_Achr4P12680_001	Banana	golgi	44.73	41.43
KRH19110	Soybean	cytosol	34.89	39.84
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	47.78	35.11
AT1G51590.1	Thale cress	golgi, mitochondrion	45.67	34.82
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	45.43	34.58
CDY22853	Canola	golgi, mitochondrion, plastid	45.43	34.58
CDY55669	Canola	golgi, mitochondrion, plastid	45.2	34.4
CDY46554	Canola	golgi, mitochondrion	44.73	34.11
CDY52948	Canola	golgi, mitochondrion	43.33	33.15
AT3G21160.1	Thale cress	golgi	43.56	32.52
CDY50074	Canola	golgi, mitochondrion, plastid	43.09	31.94
CDX82213	Canola	golgi, mitochondrion	41.92	31.91
CDY19581	Canola	golgi, mitochondrion, plastid	43.09	31.78
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	42.86	31.61
Bra001816.1-P	Field mustard	golgi, mitochondrion	42.15	31.52
CDY32409	Canola	golgi, mitochondrion	40.98	31.19
KRH02771	Soybean	golgi, plastid	41.92	30.81
Bra014291.1-P	Field mustard	mitochondrion	44.5	28.88
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	33.72	28.69
Zm00001d010454_P001	Maize	plasma membrane	24.59	16.36
Zm00001d025428_P002	Maize	cytosol	4.22	16.07
Zm00001d017997_P010	Maize	golgi	20.84	15.19
Zm00001d031739_P001	Maize	cytosol	3.98	14.17
Zm00001d012643_P007	Maize	golgi	19.2	12.6

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	UniProt:A0A1D6EBC4
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47
InterPro:IPR012341	ProteinID:ONM17644.1	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	UniParc:UPI000844BBC2	EnsemblPlantsGene:Zm00001d003736	EnsemblPlants:Zm00001d003736_P001	EnsemblPlants:Zm00001d003736_T001
SEG:seg	:	:	:	:	:

Description

Mannosyl-oligosaccharide 12-alpha-mannosidase MNS1

Coordinates

chr2:-:56946870..56951217

Molecular Weight (calculated)

48126.8 Da

IEP (calculated)

9.470

GRAVY (calculated)

-0.391

Length

427 amino acids

Sequence
(BLAST)

001: MSRQAPSAPS ASSLPRTLDK RVRLRSVSQP PSALDPRPHP RSPWKASVML ASSLNPARSP WKGPPPLPRI GLAIHGSGLT PDYARVKGQY SAWVVQSAAL
101: VTYRCLSGSP KNLPPLPRPT TRLPSPTTRW ARSGFFETWL TAMDSRWRIL SRCKKRLTDA RTRFPGLHEE LKRCVNGCDI AVIFDMLWGS ILDNFYEYLL
201: KVWIQGNKTE HVKHNRQMWD TSMEGLLSLT KKTTPSNYYY ICEKNGGSLC DKMDELACFA PGMLALGASG YGPEQSEQIM NMAKELAGTC YNFYQTTPTK
301: LVGENYFFHA GQDMSVGTSW NILRSDTVES LMYLWRLTGN TMYQDWGYCW NICVQVNTGE KDNMMQSFFL AETLKYLYLL FSPPSVISFE ECVFNTEAHP
401: LRIAPVNGNK GIGTSVRPFG RKQGNPE

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.