Factsheet for Zm00001d026257_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 1
mitochondrion 4
golgi 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d023560_P002
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT3G21160.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT3G21160.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12812	Sorghum	golgi, mitochondrion, plastid	95.92	95.92
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	95.74	95.58
Os04t0606400-01	Rice	golgi	87.94	86.71
Zm00001d019006_P001	Maize	cytosol	34.4	86.61
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	84.57	79.63
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	84.4	79.47
TraesCS2D01G430000.2	Wheat	golgi	84.04	79.13
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	83.51	78.63
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	77.84	75.56
Zm00001d031739_P001	Maize	cytosol	15.96	75.0
KRH58075	Soybean	extracellular	12.06	72.34
Zm00001d025428_P002	Maize	cytosol	14.36	72.32
AT1G51590.1	Thale cress	golgi, mitochondrion	71.63	72.14
CDY55669	Canola	golgi, mitochondrion, plastid	71.28	71.66
CDY22853	Canola	golgi, mitochondrion, plastid	71.28	71.66
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	71.28	71.66
CDY46554	Canola	golgi, mitochondrion	70.74	71.25
GSMUA_Achr4P12680_001	Banana	golgi	57.8	70.72
CDY52948	Canola	golgi, mitochondrion	69.86	70.61
CDX82213	Canola	golgi, mitochondrion	66.67	67.02
AT3G21160.1	Thale cress	golgi	67.91	66.96
CDY32409	Canola	golgi, mitochondrion	66.31	66.67
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	68.09	66.32
CDY50074	Canola	golgi, mitochondrion, plastid	67.73	66.32
Bra001816.1-P	Field mustard	golgi, mitochondrion	66.67	65.85
CDY19581	Canola	golgi, mitochondrion, plastid	67.38	65.63
KRH19110	Soybean	cytosol	42.55	64.17
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	56.74	63.74
KRH02771	Soybean	golgi, plastid	63.48	61.62
Bra014291.1-P	Field mustard	mitochondrion	71.63	61.4
Zm00001d003736_P001	Maize	plastid	42.91	56.67
Zm00001d010454_P001	Maize	plasma membrane	36.35	31.93
Zm00001d017997_P010	Maize	golgi	25.18	24.23
Zm00001d012643_P007	Maize	golgi	25.18	21.81

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	EntrezGene:103642037	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf
ProteinID:AQK45940.1	ProteinID:AQK45958.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:K7TW48	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI0002210D0A	EnsemblPlantsGene:Zm00001d026257	EnsemblPlants:Zm00001d026257_P003	EnsemblPlants:Zm00001d026257_T003	SEG:seg	:

Description

Mannosyl-oligosaccharide 12-alpha-mannosidase MNS1

Coordinates

chr10:-:142147684..142154620

Molecular Weight (calculated)

64226.7 Da

IEP (calculated)

6.009

GRAVY (calculated)

-0.489

Length

564 amino acids

Sequence
(BLAST)

001: MARRSSSSSS GAWRYLNPAY YLKRPKRLAL LFFIFVAATF AFWDRQSLVS EYESEISRLE DDINRLHDQL RRAGVHLDEN PVISNKNSRK NPVEIDHVNN
101: ERREKVKEAM LHAWNSYVKY AWGMDELQPQ SKDGINSFGG LGATLVDSLD TLYIMGLKDE FQKARDWVAE SLDFDKDYDA SVFETTIRVV GGLLSAYDLS
201: GDKVFLDKAK DITDRLLPAW DTTSGIPYNR INLAHGRAHN PGWTNGDSIL ADSGTEQLEF IALSQRTGDP KYQQKAENVI TQLQKIYPSD GLLPIYINPH
301: SGTASYSTIT FGAMGDSFYE YLLKVWIQGN KTEHVKHYRQ MWETSMEGLL SLTKKTTPSN YYYICEKNGG SLSDKMDELA CFAPGMLALG ASGYGPEKSE
401: QIMNMAKELA RTCYNFYQTT PTKLAGENYF FHAGQDMSVG TSWNILRPET VESLMYLWRL TGNTTYQDWG WDIFQAFEKN SRVESGYVGL RDVNTGEKDN
501: MMQSFFLAET LKYLYLLFSP PSVISFDEWV FNTEAHPLRI APVNYNKSIG TPVRPFGRKQ GKPE

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.