Factsheet for Os04t0606400-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
golgi 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

golgi: 25047511

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	Os11t0171500-01	AT4G09570.1	19130088
AT3G21160.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12812	Sorghum	golgi, mitochondrion, plastid	89.34	90.6
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	87.24	88.32
Zm00001d026257_P003	Maize	golgi, mitochondrion	86.71	87.94
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	83.04	79.3
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	83.04	79.3
TraesCS2D01G430000.2	Wheat	golgi	82.69	78.96
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	82.17	78.46
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	78.15	76.94
KRH58075	Soybean	extracellular	12.24	74.47
Zm00001d031739_P001	Maize	cytosol	14.86	70.83
AT1G51590.1	Thale cress	golgi, mitochondrion	69.23	70.71
CDY46554	Canola	golgi, mitochondrion	69.23	70.71
GSMUA_Achr4P12680_001	Banana	golgi	56.64	70.28
CDY52948	Canola	golgi, mitochondrion	68.36	70.07
CDY55669	Canola	golgi, mitochondrion, plastid	68.71	70.05
CDY22853	Canola	golgi, mitochondrion, plastid	68.71	70.05
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	68.71	70.05
Zm00001d025428_P002	Maize	cytosol	13.46	68.75
AT3G21160.1	Thale cress	golgi	67.66	67.66
CDY19581	Canola	golgi, mitochondrion, plastid	67.66	66.84
CDX82213	Canola	golgi, mitochondrion	65.21	66.49
CDY50074	Canola	golgi, mitochondrion, plastid	66.61	66.15
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	66.78	65.98
CDY32409	Canola	golgi, mitochondrion	64.51	65.78
Bra001816.1-P	Field mustard	golgi, mitochondrion	65.21	65.32
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	56.64	64.54
KRH19110	Soybean	cytosol	42.13	64.44
KRH02771	Soybean	golgi, plastid	62.94	61.96
Bra014291.1-P	Field mustard	mitochondrion	68.01	59.12
Os05t0209100-01	Rice	cytosol, golgi, plastid	36.01	31.94
Os02t0741300-01	Rice	mitochondrion	24.83	24.27
Os01t0773600-01	Rice	mitochondrion	25.7	21.49

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	EntrezGene:4336917	InterPro:6hp_glycosidase-like_sf
ProteinID:BAF15714.1	ProteinID:BAS90891.1	ProteinID:BAS90892.1	ProteinID:CAD41779.2	ncoils:Coil	ProteinID:EEE61634.1
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	EnsemblPlantsGene:Os04g0606400	EnsemblPlants:Os04t0606400-01
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	UniProt:Q7X6B1	SUPFAM:SSF48225
InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniParc:UPI000021C861	RefSeq:XP_015636580.1	SEG:seg	:

Description

Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113). (Os04t0606400-01);Similar to OSIGBa0113I13.2 protein. (Os04t0606400-02)

Coordinates

chr4:-:30621163..30628349

Molecular Weight (calculated)

65095.7 Da

IEP (calculated)

6.056

GRAVY (calculated)

-0.505

Length

572 amino acids

Sequence
(BLAST)

001: MARRSSSSSS SSGAWRYLNP AYYLKRPKRL ALLFFVFVAA TFAFWDRQSL VREYESEISR LDDKVNQLRD QLRKAGVHLD ENPTGDKVSR EKLVEIDPIN
101: NERREKVKEA MAHAWNSYVK YAWGMDELQP QSKNGVNSFG GLGATLVDSL DTLYIMGLKD EFQRARDWVA DSLSFDKDYD ASVFETTIRV VGGLLSAYDL
201: SGDKVFLEKA KDITDRLLPA WDTPSGIPYN RINLAHGRAH NPGWTNGDSI LADSGTEQLE FIALSQRTGD PKYQQKAENV IRQLQKIYPS DGLLPIYINP
301: HSGTASYSTI TFGAMGDSFY EYLLKVWVQG NKTEHVKHYR QMWETSMEGL LSLTKKTTPS NYYYICEKNG GSLSDKMDEL ACFAPGMLAL GASGYEETEK
401: AEEIMNLAKE LARTCYNFYQ TTPTKLAGEN YFFHTGQDMN VGTSWNILRP ETVESLMYLW RLTGNKTYQD WGWDIFQAFE KNSRIESGYV GLRDVNTGEK
501: DNMMQSFFLA ETLKYLYLLF SPPSVISFDE WVFNTEAHPL RIVPLNDNSK AHSVGIATPT VRPFGRKQGK QE

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.