CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 2
plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plasma membrane, plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRH34983
KRH34984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	KRG91803	AT4G09570.1	19130088
AT3G21160.1	KRH34983	AT4G09570.1	19130088
AT3G21160.1	KRH34984	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019006_P001	Maize	cytosol	48.94	20.54
KRH19110	Soybean	cytosol	74.47	18.72
GSMUA_Achr4P12680_001	Banana	golgi	76.6	15.62
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	79.79	14.94
KRH02771	Soybean	golgi, plastid	90.43	14.63
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	81.91	13.73
CDY22853	Canola	golgi, mitochondrion, plastid	81.91	13.73
CDY55669	Canola	golgi, mitochondrion, plastid	81.91	13.73
CDY46554	Canola	golgi, mitochondrion	80.85	13.57
CDY52948	Canola	golgi, mitochondrion	79.79	13.44
AT1G51590.1	Thale cress	golgi, mitochondrion	79.79	13.39
KRH47289	Soybean	endoplasmic reticulum	80.85	13.19
KRH44626	Soybean	mitochondrion	80.85	13.15
AT3G21160.1	Thale cress	golgi	78.72	12.94
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	78.72	12.74
CDY50074	Canola	golgi, mitochondrion, plastid	77.66	12.67
CDX82213	Canola	golgi, mitochondrion	75.53	12.66
Bra001816.1-P	Field mustard	golgi, mitochondrion	76.6	12.61
CDY19581	Canola	golgi, mitochondrion, plastid	77.66	12.61
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	77.66	12.61
CDY32409	Canola	golgi, mitochondrion	74.47	12.48
EES12812	Sorghum	golgi, mitochondrion, plastid	74.47	12.41
Os04t0606400-01	Rice	golgi	74.47	12.24
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	73.4	12.21
Zm00001d026257_P003	Maize	golgi, mitochondrion	72.34	12.06
Zm00001d003736_P001	Maize	plastid	54.26	11.94
Bra014291.1-P	Field mustard	mitochondrion	80.85	11.55
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	73.4	11.52
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	72.34	11.35
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	72.34	11.35
TraesCS2D01G430000.2	Wheat	golgi	71.28	11.19
KRH21064	Soybean	endoplasmic reticulum	42.55	6.31
KRH11192	Soybean	endoplasmic reticulum	41.49	6.16
KRH03356	Soybean	endoplasmic reticulum, golgi	21.28	3.5
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	19.15	2.91
Zm00001d025428_P002	Maize	cytosol	2.13	1.79
Zm00001d031739_P001	Maize	cytosol	2.13	1.67
KRH57025	Soybean	extracellular	2.13	0.99

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6hp_glycosidase-like_sf	EMBL:ACUP02003196
EnsemblPlantsGene:GLYMA_05G104500	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:K7KPF4	EnsemblPlants:KRH58075
ProteinID:KRH58075	ProteinID:KRH58075.1	PFAM:PF01532	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225
InterPro:Seven-hairpin_glycosidases	UniParc:UPI00029658B0	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:27791015..27791373

Molecular Weight (calculated)

11242.1 Da

IEP (calculated)

7.502

GRAVY (calculated)

-0.615

Length

94 amino acids

Sequence
(BLAST)

1: MHPIVQLAWT CYNFYQLTPT KLAGENYYFR NGHDMSVGTS WNIQRPETIE SLFYLWRFTG NKTYQEWGWN IFQAFENNSR IETGYVGLKD VRNS

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.