Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004812_P002 | |
| Zm00001d023560_P002 | |
| Zm00001d053016_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21160.1 | Zm00001d004812_P002 | AT4G09570.1 | 19130088 |
| AT3G21160.1 | Zm00001d023560_P002 | AT4G09570.1 | 19130088 |
| AT3G21160.1 | Zm00001d053016_P002 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58075 | Soybean | extracellular | 20.54 | 48.94 |
| Zm00001d003736_P001 | Maize | plastid | 75.45 | 39.58 |
| Zm00001d026257_P003 | Maize | golgi, mitochondrion | 86.61 | 34.4 |
| Zm00001d002388_P003 | Maize | golgi, mitochondrion, plastid | 83.93 | 33.27 |
| GSMUA_Achr4P12680_001 | Banana | golgi | 66.96 | 32.54 |
| KRH19110 | Soybean | cytosol | 50.0 | 29.95 |
| GSMUA_Achr2P04510_001 | Banana | golgi, mitochondrion | 68.3 | 26.33 |
| AT1G51590.1 | Thale cress | golgi, mitochondrion | 64.29 | 25.71 |
| CDY22853 | Canola | golgi, mitochondrion, plastid | 63.84 | 25.49 |
| Bra018917.1-P | Field mustard | golgi, mitochondrion, plastid | 63.39 | 25.31 |
| CDY55669 | Canola | golgi, mitochondrion, plastid | 62.95 | 25.13 |
| CDY46554 | Canola | golgi, mitochondrion | 62.5 | 25.0 |
| CDY52948 | Canola | golgi, mitochondrion | 59.82 | 24.01 |
| AT3G21160.1 | Thale cress | golgi | 60.71 | 23.78 |
| CDY50074 | Canola | golgi, mitochondrion, plastid | 60.71 | 23.61 |
| CDY32409 | Canola | golgi, mitochondrion | 58.93 | 23.53 |
| CDY19581 | Canola | golgi, mitochondrion, plastid | 60.71 | 23.49 |
| CDX82213 | Canola | golgi, mitochondrion | 58.48 | 23.35 |
| Bra031256.1-P | Field mustard | golgi, mitochondrion, plastid | 60.27 | 23.32 |
| Bra001816.1-P | Field mustard | golgi, mitochondrion | 59.38 | 23.29 |
| KRH02771 | Soybean | golgi, plastid | 56.7 | 21.86 |
| Bra014291.1-P | Field mustard | mitochondrion | 62.05 | 21.12 |
| VIT_11s0052g00140.t01 | Wine grape | golgi, mitochondrion | 41.07 | 18.33 |
| Zm00001d010454_P001 | Maize | plasma membrane | 33.48 | 11.68 |
| Zm00001d017997_P010 | Maize | golgi | 22.32 | 8.53 |
| Zm00001d012643_P007 | Maize | golgi | 22.32 | 7.68 |
| Zm00001d025428_P002 | Maize | cytosol | 1.79 | 3.57 |
| Zm00001d031739_P001 | Maize | cytosol | 1.34 | 2.5 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:50.3.2 | InterPro:6hp_glycosidase-like_sf | UniProt:A0A1D6HUB9 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004571 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Glyco_hydro_47 |
| InterPro:IPR012341 | ProteinID:ONM51898.1 | PFAM:PF01532 | PRINTS:PR00747 | PANTHER:PTHR11742 | PANTHER:PTHR11742:SF42 |
| SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases | UniParc:UPI00084276A9 | EnsemblPlantsGene:Zm00001d019006 | EnsemblPlants:Zm00001d019006_P001 | EnsemblPlants:Zm00001d019006_T001 |
Description
Mannosyl-oligosaccharide 12-alpha-mannosidase MNS1
Coordinates
chr7:+:12740141..12741548
Molecular Weight (calculated)
25713.6 Da
IEP (calculated)
5.353
GRAVY (calculated)
-0.465
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNNSIHVFH FRQMWETSME GQLSLTKKTT PSNYYYICEK NGGSLSDKMD ELACFAPDML ALGASGYGPE KSEQIMNMAK EVNPCGNPPG FRRFQDMSVG
101: TSWNILRPET VESLMYLWRL TGNTTYQDWG WDIFQAFEKN FRVEFGYVGL RDVNTGEKDN MMQSFFLAET LKYLYLLFFP PSVISFEDWV FNTEAHPLRI
201: APVNGNKGIG TPVRPFGRKQ GKPE
101: TSWNILRPET VESLMYLWRL TGNTTYQDWG WDIFQAFEKN FRVEFGYVGL RDVNTGEKDN MMQSFFLAET LKYLYLLFFP PSVISFEDWV FNTEAHPLRI
201: APVNGNKGIG TPVRPFGRKQ GKPE
001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV
Arabidopsis Description
MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.