Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004812_P002 | |
| Zm00001d023560_P002 | |
| Zm00001d053016_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21160.1 | Zm00001d004812_P002 | AT4G09570.1 | 19130088 |
| AT3G21160.1 | Zm00001d023560_P002 | AT4G09570.1 | 19130088 |
| AT3G21160.1 | Zm00001d053016_P002 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031739_P001 | Maize | cytosol | 90.18 | 84.17 |
| GSMUA_Achr4P12680_001 | Banana | golgi | 60.71 | 14.75 |
| Zm00001d002388_P003 | Maize | golgi, mitochondrion, plastid | 73.21 | 14.51 |
| Zm00001d026257_P003 | Maize | golgi, mitochondrion | 72.32 | 14.36 |
| EES12812 | Sorghum | golgi, mitochondrion, plastid | 71.43 | 14.18 |
| Os04t0606400-01 | Rice | golgi | 68.75 | 13.46 |
| VIT_11s0052g00140.t01 | Wine grape | golgi, mitochondrion | 58.04 | 12.95 |
| CDX82213 | Canola | golgi, mitochondrion | 64.29 | 12.83 |
| Bra001816.1-P | Field mustard | golgi, mitochondrion | 64.29 | 12.61 |
| CDY52948 | Canola | golgi, mitochondrion | 62.5 | 12.54 |
| HORVU2Hr1G100750.2 | Barley | golgi, mitochondrion, plastid | 66.96 | 12.52 |
| TraesCS2D01G430000.2 | Wheat | golgi | 66.96 | 12.52 |
| TraesCS2A01G432100.2 | Wheat | golgi, mitochondrion, plastid | 66.96 | 12.52 |
| CDY50074 | Canola | golgi, mitochondrion, plastid | 64.29 | 12.5 |
| CDY46554 | Canola | golgi, mitochondrion | 62.5 | 12.5 |
| CDY32409 | Canola | golgi, mitochondrion | 62.5 | 12.48 |
| TraesCS2B01G453500.2 | Wheat | golgi, mitochondrion, plastid | 66.07 | 12.35 |
| AT1G51590.1 | Thale cress | golgi, mitochondrion | 61.61 | 12.32 |
| Bra031256.1-P | Field mustard | golgi, mitochondrion, plastid | 63.39 | 12.26 |
| CDY19581 | Canola | golgi, mitochondrion, plastid | 63.39 | 12.26 |
| Bra018917.1-P | Field mustard | golgi, mitochondrion, plastid | 60.71 | 12.12 |
| CDY22853 | Canola | golgi, mitochondrion, plastid | 60.71 | 12.12 |
| CDY55669 | Canola | golgi, mitochondrion, plastid | 60.71 | 12.12 |
| AT3G21160.1 | Thale cress | golgi | 61.61 | 12.06 |
| GSMUA_Achr2P04510_001 | Banana | golgi, mitochondrion | 61.61 | 11.88 |
| Bra014291.1-P | Field mustard | mitochondrion | 62.5 | 10.64 |
| KRH02771 | Soybean | golgi, plastid | 54.46 | 10.5 |
| KRH19110 | Soybean | cytosol | 29.46 | 8.82 |
| Zm00001d012643_P007 | Maize | golgi | 36.61 | 6.3 |
| Zm00001d017997_P010 | Maize | golgi | 32.14 | 6.14 |
| Zm00001d010454_P001 | Maize | plasma membrane | 32.14 | 5.61 |
| Zm00001d003736_P001 | Maize | plastid | 16.07 | 4.22 |
| KRH58075 | Soybean | extracellular | 1.79 | 2.13 |
| Zm00001d019006_P001 | Maize | cytosol | 3.57 | 1.79 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:50.3.2 | InterPro:6hp_glycosidase-like_sf | UniProt:A0A1D6J715 |
| ProteinID:AQK43716.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004571 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 |
| InterPro:Glyco_hydro_47 | InterPro:IPR012341 | PFAM:PF01532 | PRINTS:PR00747 | PANTHER:PTHR11742 | PANTHER:PTHR11742:SF42 |
| SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases | UniParc:UPI000844B958 | EnsemblPlantsGene:Zm00001d025428 | EnsemblPlants:Zm00001d025428_P002 | EnsemblPlants:Zm00001d025428_T002 |
Description
Mannosyl-oligosaccharide 12-alpha-mannosidase MNS1
Coordinates
chr10:-:118316533..118317062
Molecular Weight (calculated)
12780.0 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.224
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMSYNSWVA ESLDFDKDYD ASVFETTIRV VGGLLSSYDL SGDKVFLDKA KDITDRLLPA WDTTSGIPYN RINLAHGRAH NPGWTNVSYC YSVFPLSNHL
101: YFKYLLKHTV VH
101: YFKYLLKHTV VH
001: MARNKLVSGS HGIWKYFNPA FYLRRPRRLA LLIILFVSVS MVVWDRQSLS RDYQFEVSKL NEEVLRLQQM LEEIKSVTED VSVNSLKDVQ EDPVDAQRMQ
101: RVKEAMVHAW SSYEKYAWGQ DELQPQTKDG VDSFGGLGAT MIDALDTLYI MGLDEQFQKA REWVASSLDF DKDYAASMFE TTIRVVGGLL SAYDLSGDKI
201: FLEKAMDIAD RLLPAWDTQS GIPYNIINLK HGNAHNPTWA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVISVLN KNFPADGLLP IYINPDTANP
301: SQSTITFGAM GDSFYEYLLK VWVFGNKTSA VKHYRDMWEK SMNGLLSLVK KSTPLSFTYI CEKSGNSLID KMDELACFAP GMLALGASGY SDPAEGKKFL
401: TLAEEVNL
101: RVKEAMVHAW SSYEKYAWGQ DELQPQTKDG VDSFGGLGAT MIDALDTLYI MGLDEQFQKA REWVASSLDF DKDYAASMFE TTIRVVGGLL SAYDLSGDKI
201: FLEKAMDIAD RLLPAWDTQS GIPYNIINLK HGNAHNPTWA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVISVLN KNFPADGLLP IYINPDTANP
301: SQSTITFGAM GDSFYEYLLK VWVFGNKTSA VKHYRDMWEK SMNGLLSLVK KSTPLSFTYI CEKSGNSLID KMDELACFAP GMLALGASGY SDPAEGKKFL
401: TLAEEVNL
Arabidopsis Description
MNS2Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H116]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.