Factsheet for TraesCS2A01G432100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	TraesCS4A01G206200.2	AT4G09570.1	19130088
AT3G21160.1	TraesCS4B01G109800.2	AT4G09570.1	19130088
AT3G21160.1	TraesCS4D01G107200.1	AT4G09570.1	19130088
AT3G21160.1	TraesCS5A01G107900.1	AT4G09570.1	19130088
AT3G21160.1	TraesCS5B01G115400.1	AT4G09570.1	19130088
AT3G21160.1	TraesCS5D01G122800.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G430000.2	Wheat	golgi	98.5	98.5
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	98.16	98.16
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	98.16	98.16
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	80.3	85.13
Zm00001d026257_P003	Maize	golgi, mitochondrion	79.47	84.4
EES12812	Sorghum	golgi, mitochondrion, plastid	79.47	84.4
Os04t0606400-01	Rice	golgi	79.3	83.04
KRH58075	Soybean	extracellular	11.52	73.4
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	71.12	73.32
Zm00001d031739_P001	Maize	cytosol	14.02	70.0
GSMUA_Achr4P12680_001	Banana	golgi	53.42	69.41
AT1G51590.1	Thale cress	golgi, mitochondrion	64.61	69.11
CDY55669	Canola	golgi, mitochondrion, plastid	64.61	68.98
CDY22853	Canola	golgi, mitochondrion, plastid	64.61	68.98
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	64.61	68.98
CDY46554	Canola	golgi, mitochondrion	63.44	67.86
CDY52948	Canola	golgi, mitochondrion	62.77	67.38
Zm00001d025428_P002	Maize	cytosol	12.52	66.96
CDY50074	Canola	golgi, mitochondrion, plastid	62.94	65.45
CDX82213	Canola	golgi, mitochondrion	61.27	65.42
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	62.77	64.94
AT3G21160.1	Thale cress	golgi	61.94	64.86
CDY32409	Canola	golgi, mitochondrion	60.6	64.71
Bra001816.1-P	Field mustard	golgi, mitochondrion	61.1	64.1
CDY19581	Canola	golgi, mitochondrion, plastid	61.94	64.08
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	53.09	63.35
KRH19110	Soybean	cytosol	39.07	62.57
KRH02771	Soybean	golgi, plastid	59.6	61.45
Bra014291.1-P	Field mustard	mitochondrion	64.61	58.81
TraesCS1A01G126300.2	Wheat	plastid	35.39	32.47
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	24.21	24.96
TraesCS3A01G322000.1	Wheat	golgi	23.37	20.93

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747
PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G432100
EnsemblPlants:TraesCS2A01G432100.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:685217838..685223596

Molecular Weight (calculated)

67619.8 Da

IEP (calculated)

5.710

GRAVY (calculated)

-0.386

Length

599 amino acids

Sequence
(BLAST)

001: MARRSSSSSS SGAWRYLNPA YYLKRPKRLA LLFFVFVAAT FAFWDRQSLV SEYECPSCVR VNEGIVFSQE IFVTAHVFDV ITDGKSEISQ LQNEINQLHG
101: QLRKAGVQLE ENPATEIPRK DLVEIDPINN ERREKVKDAM LHAWNSYVKY AWGMDELQPQ SKNGVNSFGG LGATLVDSLD TLYIMGLRDE FQKARDWVAE
201: SLSFDKDYDA SVFETTIRVV GGLLSAYDMS GDKVFLEKAK DIADRLLPAW DTTSGIPYNS INLAHGRAHN FGWTNGDSIL ADSGTEQLEF IALSQRTGDP
301: KYQLKAENVI RQLQKIYPSD GLLPIYINPQ SGQASYSTIT FGAMGDSFYE YLLKVWIQGN KTESVKHYRQ MWETSMEGLI SLTRQTTPSN YTYICEKSGG
401: SLSHKMDELA CFAPGMLALG ASGYGPEKAK QIMNLAEELA RTCYNFYQTT PTKLAGENYY FHAGQDMNVG TSWNILRPET VESLMYLWRL TGNKTYQDWG
501: WDIFQAFEKN SRIASGYVGL RDVNSGEKDD KMQTFFLAET LKYLYLLFSP PSVVSFDEWV FNTEAHPLRI VPTHGSNGQS IETATPVVRP FGRKQGKQG

Best Arabidopsis Sequence Match ( AT3G21160.1 )
(BLAST)

001: MARNKLVSGS HGIWKYFNPA FYLRRPRRLA LLIILFVSVS MVVWDRQSLS RDYQFEVSKL NEEVLRLQQM LEEIKSVTED VSVNSLKDVQ EDPVDAQRMQ
101: RVKEAMVHAW SSYEKYAWGQ DELQPQTKDG VDSFGGLGAT MIDALDTLYI MGLDEQFQKA REWVASSLDF DKDYAASMFE TTIRVVGGLL SAYDLSGDKI
201: FLEKAMDIAD RLLPAWDTQS GIPYNIINLK HGNAHNPTWA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVISVLN KNFPADGLLP IYINPDTANP
301: SQSTITFGAM GDSFYEYLLK VWVFGNKTSA VKHYRDMWEK SMNGLLSLVK KSTPLSFTYI CEKSGNSLID KMDELACFAP GMLALGASGY SDPAEGKKFL
401: TLAEELAWTC YNFYQSTPTK LAGENYFFNS GSDMSVGTSW NILRPETVES LFYLWRLTGN KTYQEWGWNI FEAFEKNSRI ESGYVGLKDV NTGVKDNKMQ
501: SFFLAETLKY LYLLFSPTTV IPLDEWVFNT EAHPLKIKSR NDQVNLKQSN KVLLRKPAFR IRQRHYGRIT KK

Arabidopsis Description

MNS2Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H116]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.