Factsheet for Bra001816.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
golgi 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82213	Canola	golgi, mitochondrion	93.87	95.54
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	83.19	82.04
AT3G21160.1	Thale cress	golgi	80.74	80.59
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	76.88	78.25
KRH58075	Soybean	extracellular	12.61	76.6
PGSC0003DMT400023755	Potato	cytosol	33.27	72.52
VIT_09s0054g00230.t01	Wine grape	cytosol	43.08	71.72
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	70.23	69.74
KRH47289	Soybean	endoplasmic reticulum	70.23	69.62
VIT_09s0054g00310.t01	Wine grape	cytosol	11.03	68.48
KRH44626	Soybean	mitochondrion	69.0	68.17
Solyc03g123900.2.1	Tomato	extracellular, nucleus	68.83	67.88
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	66.2	66.9
Zm00001d026257_P003	Maize	golgi, mitochondrion	65.85	66.67
EES12812	Sorghum	golgi, mitochondrion, plastid	65.85	66.67
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	67.43	66.27
Bra014291.1-P	Field mustard	mitochondrion	75.48	65.5
Os04t0606400-01	Rice	golgi	65.32	65.21
Solyc06g063260.2.1	Tomato	golgi, mitochondrion	64.45	65.13
Zm00001d031739_P001	Maize	cytosol	13.66	65.0
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	57.09	64.94
GSMUA_Achr4P12680_001	Banana	golgi	52.19	64.64
Zm00001d025428_P002	Maize	cytosol	12.61	64.29
KRH19110	Soybean	cytosol	41.16	62.83
TraesCS2D01G430000.2	Wheat	golgi	64.45	61.44
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	64.27	61.27
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	64.1	61.1
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	64.1	61.1
KRH02771	Soybean	golgi, plastid	60.6	59.55
Zm00001d019006_P001	Maize	cytosol	23.29	59.38
Zm00001d003736_P001	Maize	plastid	31.52	42.15
Bra010804.1-P	Field mustard	golgi	36.78	34.65
Bra032351.1-P	Field mustard	golgi	36.6	33.87
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	23.99	23.99
Bra035984.1-P	Field mustard	extracellular, golgi	21.37	20.89

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	EnsemblPlantsGene:Bra001816
EnsemblPlants:Bra001816.1	EnsemblPlants:Bra001816.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M4CC86	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI0002540631	:	:	:	:	:

Description

AT3G21160 (E=2e-285) | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative

Coordinates

chrA03:-:18616780..18619846

Molecular Weight (calculated)

64870.4 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.394

Length

571 amino acids

Sequence
(BLAST)

001: MARSRLVTGH GIWKYVNPAY NLGRTMRLAL LFILFISVSM VVWDRQTRAR DHEFEVLKLN KQVLRLQLML GDVKSVKEDA TMRTLKSVKE EPVDARRRQR
101: VKEAMIHAWS SYEKYAWGKD ELQPQTKDGV DSFGGLGATI IDALDTLYIM GLHEQFQKAR EWVAASLDFD KDYDASMFET TIRVVGGLLS SYDLSGDKLF
201: LEKAKDIADR LLPAWDTPSG IPYNIINLRH GNAHNPTWGG GDSNLAESGT EQLEFIALSQ RTGDPKYQQK VEKVITVLNK NYPADGLLPV YINPDTAEPS
301: YSTITFGGGG DSFYEYLLKV WVFGNKTLTV KHYRDMWEKS MNGLLSLVKK STPSSFTYIC EKSGSSLTHK MDELACFAPG MLALGSSGYD DPTHAKKFLT
401: LAEELAWTCY NFYESTPTKL AGENYVFNSG SDMSVGASSN ILRPETVESL FYLWRLTGNK TYQDWGWNIF EAFEKNSRIE TGYVGLKDVN TGVKDNKMQS
501: FFLAETLKYL YLLFSPATVI PLDEWVFNTE AHPLKIVPWK DQVNPGQSNS VQQRKPRVSL RKRRFGRMEH K

Best Arabidopsis Sequence Match ( AT3G21160.1 )
(BLAST)

001: MARNKLVSGS HGIWKYFNPA FYLRRPRRLA LLIILFVSVS MVVWDRQSLS RDYQFEVSKL NEEVLRLQQM LEEIKSVTED VSVNSLKDVQ EDPVDAQRMQ
101: RVKEAMVHAW SSYEKYAWGQ DELQPQTKDG VDSFGGLGAT MIDALDTLYI MGLDEQFQKA REWVASSLDF DKDYAASMFE TTIRVVGGLL SAYDLSGDKI
201: FLEKAMDIAD RLLPAWDTQS GIPYNIINLK HGNAHNPTWA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVISVLN KNFPADGLLP IYINPDTANP
301: SQSTITFGAM GDSFYEYLLK VWVFGNKTSA VKHYRDMWEK SMNGLLSLVK KSTPLSFTYI CEKSGNSLID KMDELACFAP GMLALGASGY SDPAEGKKFL
401: TLAEELAWTC YNFYQSTPTK LAGENYFFNS GSDMSVGTSW NILRPETVES LFYLWRLTGN KTYQEWGWNI FEAFEKNSRI ESGYVGLKDV NTGVKDNKMQ
501: SFFLAETLKY LYLLFSPTTV IPLDEWVFNT EAHPLKIKSR NDQVNLKQSN KVLLRKPAFR IRQRHYGRIT KK

Arabidopsis Description

MNS2Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H116]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.