Factsheet for Solyc06g063260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
golgi 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g065380.2.1
Solyc11g018610.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21160.1	Solyc06g065380.2.1	AT4G09570.1	19130088
AT3G21160.1	Solyc11g018610.1.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g123900.2.1	Tomato	extracellular, nucleus	81.24	79.27
VIT_09s0054g00230.t01	Wine grape	cytosol	45.66	75.22
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	75.22	73.91
VIT_09s0054g00310.t01	Wine grape	cytosol	11.68	71.74
KRH47289	Soybean	endoplasmic reticulum	73.1	71.7
CDY46554	Canola	golgi, mitochondrion	69.73	70.36
KRH44626	Soybean	mitochondrion	71.86	70.24
CDY52948	Canola	golgi, mitochondrion	69.2	70.07
AT1G51590.1	Thale cress	golgi, mitochondrion	69.03	69.64
CDY22853	Canola	golgi, mitochondrion, plastid	68.67	69.16
CDY55669	Canola	golgi, mitochondrion, plastid	68.67	69.16
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	68.5	68.98
AT3G21160.1	Thale cress	golgi	68.85	68.01
CDY19581	Canola	golgi, mitochondrion, plastid	68.32	66.67
CDY50074	Canola	golgi, mitochondrion, plastid	67.61	66.32
Bra031256.1-P	Field mustard	golgi, mitochondrion, plastid	67.61	65.98
CDX82213	Canola	golgi, mitochondrion	64.96	65.42
CDY32409	Canola	golgi, mitochondrion	64.25	64.71
Bra001816.1-P	Field mustard	golgi, mitochondrion	65.13	64.45
Bra014291.1-P	Field mustard	mitochondrion	68.85	59.12
Solyc02g070520.2.1	Tomato	nucleus	35.93	32.27
Solyc03g113900.2.1	Tomato	golgi	23.36	22.84
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	24.25	22.17

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	ncoils:Coil
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:K4C757
PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
EnsemblPlantsGene:Solyc06g063260.2	EnsemblPlants:Solyc06g063260.2.1	TMHMM:TMhelix	UniParc:UPI0002766D14	SEG:seg	:

Description

alpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:K4C757]

Coordinates

chr6:-:39954491..39966837

Molecular Weight (calculated)

64524.1 Da

IEP (calculated)

6.374

GRAVY (calculated)

-0.484

Length

565 amino acids

Sequence
(BLAST)

001: MVRSRSSANK WKYINPSYYL KRPKRLALLF IVFVFGSFFF WDRQTLVRDH QEEISKLSEE VIRLQDLLED LKNDQSVSGE TMNFSHSDGD VGKKIDYTED
101: PVDAQRREKV KDAMRHAWSS YEKYAWGHDE LQPQTKNGVD SFGGLGATLI DSLDTLYIMG LDEQFQRARE WVANSLDFNK NYDASVFETT IRLFLEKAQD
201: IADRLLPAWN TPTGIPYNII NLSHGNPHNH GWTAGHSILA DSASEQLEFI ALSQRTGDPK YQQKAENVIL EISRTFPDDG LLPIHINPEG KAVVYSTITF
301: GAMGDSFYEY LLKVWIQGNR TTAVDRYRKM WETSMKGLSS LVRRTFPSSF AYIGEKVGDS FVDKMDELAC FAPGMLALGS SGYGPDDSQK FLSLAEELAW
401: TCYNFYQSTP TKLAGENYVF NKGQDMTVGT SWNILRPETV ESLFYLWRLT GNKTYQEWGW NIFQAFEKNS RIESGYVGLK DVNSGVQDNM MQSFFLAETL
501: KYLYLLYSPP SVIPLGEWVF NTEAHPIKIV SRNDRAMTSG AGKSAGQQKS YKRPLTRREG RFGNK

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.