Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_18s0072g01030.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21160.1 | VIT_18s0072g01030.t01 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023755 | Potato | cytosol | 71.74 | 25.19 |
| VIT_09s0054g00230.t01 | Wine grape | cytosol | 73.91 | 19.83 |
| VIT_11s0052g00140.t01 | Wine grape | golgi, mitochondrion | 68.48 | 12.55 |
| VIT_09s0054g00370.t01 | Wine grape | golgi, mitochondrion | 76.09 | 12.17 |
| KRH47289 | Soybean | endoplasmic reticulum | 76.09 | 12.15 |
| AT1G51590.1 | Thale cress | golgi, mitochondrion | 73.91 | 12.14 |
| KRH44626 | Soybean | mitochondrion | 76.09 | 12.11 |
| CDY52948 | Canola | golgi, mitochondrion | 72.83 | 12.01 |
| CDY46554 | Canola | golgi, mitochondrion | 72.83 | 11.96 |
| AT3G21160.1 | Thale cress | golgi | 73.91 | 11.89 |
| CDY55669 | Canola | golgi, mitochondrion, plastid | 71.74 | 11.76 |
| CDY22853 | Canola | golgi, mitochondrion, plastid | 71.74 | 11.76 |
| Bra018917.1-P | Field mustard | golgi, mitochondrion, plastid | 71.74 | 11.76 |
| Solyc03g123900.2.1 | Tomato | extracellular, nucleus | 73.91 | 11.74 |
| Solyc06g063260.2.1 | Tomato | golgi, mitochondrion | 71.74 | 11.68 |
| CDY50074 | Canola | golgi, mitochondrion, plastid | 71.74 | 11.46 |
| CDY19581 | Canola | golgi, mitochondrion, plastid | 71.74 | 11.4 |
| Bra031256.1-P | Field mustard | golgi, mitochondrion, plastid | 71.74 | 11.4 |
| CDY32409 | Canola | golgi, mitochondrion | 67.39 | 11.05 |
| CDX82213 | Canola | golgi, mitochondrion | 67.39 | 11.05 |
| Bra001816.1-P | Field mustard | golgi, mitochondrion | 68.48 | 11.03 |
| Bra014291.1-P | Field mustard | mitochondrion | 72.83 | 10.18 |
| VIT_10s0003g03280.t01 | Wine grape | cytosol | 41.3 | 5.95 |
| VIT_17s0000g07760.t01 | Wine grape | extracellular, golgi | 20.65 | 3.32 |
| VIT_05s0020g04650.t01 | Wine grape | endoplasmic reticulum | 17.39 | 2.35 |
| VIT_11s0052g00150.t01 | Wine grape | extracellular, golgi, vacuole | 0.0 | 0.0 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:50.3.2 | InterPro:6hp_glycosidase-like_sf | ProteinID:CCB45080 |
| ProteinID:CCB45080.1 | UniProt:F6GYP4 | EMBL:FN594972 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004571 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | InterPro:Glyco_hydro_47 |
| InterPro:IPR012341 | PFAM:PF01532 | PANTHER:PTHR11742 | PANTHER:PTHR11742:SF42 | SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases |
| UniParc:UPI0002109D0E | ArrayExpress:VIT_09s0054g00310 | EnsemblPlantsGene:VIT_09s0054g00310 | EnsemblPlants:VIT_09s0054g00310.t01 | : | : |
Description
No Description!
Coordinates
chr9:-:20806152..20808251
Molecular Weight (calculated)
11050.1 Da
IEP (calculated)
9.008
GRAVY (calculated)
-0.560
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MKEPYEMKIS HAVLREGILA WTCYNFYQST PTKLARENYF FHSGQDMSVG TSWNILRPET VESLFYLWRL TGNKTYQEWG WNIFHHLKRT PA
001: MIHAWSSYEK YAWGKDELQP RTKDGTDSFG GLGATMVDSL DTLYIMGLDE QFQKAREWVA SSLDFDKDYD ASMFETTIRV VGGLLSAYDL SGDKMFLEKA
101: KDIADRLLPA WNTPTGIPYN IINLRNGNAH NPSWAAGGDS ILADSGTEQL EFIALSQRTG DPKYQQKVEK VITELNKNFP ADGLLPIYIN PDNANPSYST
201: TTFGAMGDSF YEYLLKVWVQ GNKTSAVKPY RDMWEKSMKG LLSLVKKSTP SSFTYICEKN GNNLIDKMDE LACFAPGMLA LGASGYGPDE EKKFLSLAGE
301: LAWTCYNFYQ STPTKLAGEN YFFTAGQDMS VGTSWNILRP ETVESLFYLW RLTGNKTYQE WGWNIFQAFE KNSRVESGYV GLKDVNTGAK DNKMQSFFLA
401: ETLKYLYLLF SPSSVISLDE WVFNTEAHPL KIVARNDPRK PTIALRQRKF GHQINV
101: KDIADRLLPA WNTPTGIPYN IINLRNGNAH NPSWAAGGDS ILADSGTEQL EFIALSQRTG DPKYQQKVEK VITELNKNFP ADGLLPIYIN PDNANPSYST
201: TTFGAMGDSF YEYLLKVWVQ GNKTSAVKPY RDMWEKSMKG LLSLVKKSTP SSFTYICEKN GNNLIDKMDE LACFAPGMLA LGASGYGPDE EKKFLSLAGE
301: LAWTCYNFYQ STPTKLAGEN YFFTAGQDMS VGTSWNILRP ETVESLFYLW RLTGNKTYQE WGWNIFQAFE KNSRVESGYV GLKDVNTGAK DNKMQSFFLA
401: ETLKYLYLLF SPSSVISLDE WVFNTEAHPL KIVARNDPRK PTIALRQRKF GHQINV
Arabidopsis Description
MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.