Factsheet for VIT_18s0072g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0370g00040.t01
VIT_00s1526g00010.t01
VIT_00s2416g00010.t01
VIT_00s2761g00010.t01
VIT_01s0011g03110.t01
VIT_01s0011g04860.t01
VIT_01s0011g06360.t01
VIT_02s0025g00900.t01
VIT_04s0008g02000.t01
VIT_04s0008g04700.t01
VIT_04s0008g04710.t01
VIT_04s0008g06310.t01
VIT_04s0023g00840.t01
VIT_04s0044g02040.t01
VIT_05s0020g03610.t01
VIT_05s0029g00420.t01
VIT_05s0077g02060.t01
VIT_05s0077g02070.t01
VIT_05s0077g02320.t01
VIT_06s0061g00230.t01
VIT_07s0005g00690.t01
VIT_08s0007g01570.t01
VIT_08s0007g03780.t01
VIT_08s0040g02360.t01
VIT_08s0040g03360.t01
VIT_09s0054g00010.t01
VIT_09s0054g00030.t01
VIT_09s0054g00060.t01
VIT_09s0054g00090.t01
VIT_09s0054g00140.t01
VIT_09s0054g00190.t01
VIT_09s0054g00210.t01
VIT_09s0054g00230.t01
VIT_09s0054g00310.t01
VIT_09s0054g00370.t01
VIT_10s0092g00330.t01
VIT_11s0016g01450.t01
VIT_11s0052g00140.t01
VIT_11s0052g00290.t01
VIT_11s0103g00260.t01
VIT_12s0028g03010.t01
VIT_12s0057g00020.t01
VIT_13s0158g00160.t01
VIT_14s0036g01220.t01
VIT_14s0060g01930.t01
VIT_16s0050g01060.t01
VIT_17s0000g00340.t01
VIT_17s0000g06280.t01
VIT_17s0000g09790.t01
VIT_18s0072g00720.t01
VIT_19s0015g00430.t01
VIT_19s0090g01130.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G35670.1	VIT_01s0011g06360.t01	AT1G14687.1	19130088
AT1G35670.1	VIT_01s0011g04860.t01	AT1G23080.1	19130088
AT1G35670.1	VIT_01s0011g03110.t01	AT1G25550.1	19130088
AT1G35670.1	VIT_04s0008g04700.t01	AT1G52740.1	19130088
AT1G35670.1	VIT_04s0023g00840.t01	AT1G65290.1	19130088
AT1G35670.1	VIT_04s0044g02040.t01	AT1G65650.1	19130088
AT1G35670.1	VIT_17s0000g06280.t01	AT1G74470.1	19130088
AT1G35670.1	VIT_12s0057g00020.t01	AT2G20890.1	19130088
AT1G35670.1	VIT_05s0020g03610.t01	AT3G22530.1	19130088
AT1G35670.1	VIT_17s0000g09790.t01	AT3G48360.1	19130088
AT1G35670.1	VIT_05s0020g03610.t01	AT4G14830.1	19130088
AT1G35670.1	VIT_00s0370g00040.t01	AT4G21670.1	19130088
AT1G35670.1	VIT_05s0077g02320.t01	AT5G27760.1	19130088
AT1G35670.1	VIT_05s0077g02060.t01	AT5G27850.1	19130088
AT1G35670.1	VIT_05s0077g02070.t01	AT5G27850.1	19130088
AT1G35670.1	VIT_07s0005g00690.t01	AT5G27850.1	19130088
AT1G35670.1	VIT_14s0036g01220.t01	AT5G27850.1	19130088
AT1G35670.1	VIT_14s0060g01930.t01	AT5G27850.1	19130088
AT1G35670.1	VIT_02s0025g00900.t01	AT5G41670.1	19130088
AT1G35670.1	VIT_16s0050g01060.t01	AT5G52550.1	19130088
AT1G35670.1	VIT_08s0040g03360.t01	AT5G59880.1	19130088
AT1G35670.1	VIT_10s0092g00330.t01	AT5G59880.1	19130088
AT1G35670.1	VIT_11s0103g00260.t01	AT5G59880.1	19130088
AT4G09570.1	VIT_12s0028g03010.t01	AT1G03850.1	19130088
AT4G09570.1	VIT_01s0011g04860.t01	AT1G23080.1	19130088
AT4G09570.1	VIT_18s0072g00720.t01	AT1G76850.1	19130088
AT4G09570.1	VIT_00s1526g00010.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_00s2416g00010.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_00s2761g00010.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00010.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00030.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00060.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00090.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00140.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00190.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_09s0054g00210.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_11s0052g00290.t01	AT2G01250.1	19130088
AT4G09570.1	VIT_12s0057g00020.t01	AT2G20890.1	19130088
AT4G09570.1	VIT_04s0008g04710.t01	AT2G26640.1	19130088
AT4G09570.1	VIT_08s0007g03780.t01	AT2G36420.1	19130088
AT4G09570.1	VIT_19s0090g01130.t01	AT3G20290.1	19130088
AT4G09570.1	VIT_06s0061g00230.t01	AT3G21090.1	19130088
AT4G09570.1	VIT_09s0054g00230.t01	AT3G21160.1	19130088
AT4G09570.1	VIT_09s0054g00310.t01	AT3G21160.1	19130088
AT4G09570.1	VIT_09s0054g00370.t01	AT3G21160.1	19130088
AT4G09570.1	VIT_11s0052g00140.t01	AT3G21160.1	19130088
AT4G09570.1	VIT_05s0020g03610.t01	AT3G22530.1	19130088
AT4G09570.1	VIT_05s0029g00420.t01	AT3G23820.1	19130088
AT4G09570.1	VIT_11s0016g01450.t01	AT3G42800.1	19130088
AT4G09570.1	VIT_17s0000g09790.t01	AT3G48360.1	19130088
AT4G09570.1	VIT_08s0007g01570.t01	AT3G54050.1	19130088
AT4G09570.1	VIT_05s0020g03610.t01	AT4G14830.1	19130088
AT4G09570.1	VIT_04s0008g06310.t01	AT4G32070.1	19130088
AT4G09570.1	VIT_08s0040g02360.t01	AT5G03040.1	19130088
AT4G09570.1	VIT_04s0008g02000.t01	AT5G21940.1	19130088
AT4G09570.1	VIT_13s0158g00160.t01	AT5G43210.1	19130088
AT4G09570.1	VIT_17s0000g00340.t01	AT5G50920.1	19130088
AT4G09570.1	VIT_19s0015g00430.t01	AT5G55660.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91803	Soybean	mitochondrion	80.57	80.41
KRH34984	Soybean	cytosol	80.37	79.88
AT1G35670.1	Thale cress	cytosol	79.55	78.59
GSMUA_Achr2P08110_001	Banana	cytosol, plastid	79.55	78.59
GSMUA_Achr9P08680_001	Banana	cytosol	75.66	78.39
Bra034407.1-P	Field mustard	cytosol	79.55	78.27
CDY37101	Canola	cytosol	79.55	78.27
CDX90725	Canola	cytosol	79.96	78.2
CDY05064	Canola	cytosol	79.96	78.2
CDX73342	Canola	nucleus, plasma membrane	79.35	78.07
VIT_07s0130g00130.t01	Wine grape	cytosol	79.14	77.87
AT4G09570.1	Thale cress	cytosol	79.35	77.45
GSMUA_Achr10P...	Banana	cytosol, plastid	78.94	76.59
GSMUA_Achr6P25560_001	Banana	cytosol	75.26	76.51
PGSC0003DMT400067082	Potato	cytosol, plastid	77.91	76.05
Solyc06g065380.2.1	Tomato	cytosol, plastid	78.12	75.35
Solyc11g018610.1.1	Tomato	cytosol	76.07	73.66
PGSC0003DMT400002331	Potato	cytosol	75.46	73.07
TraesCS4B01G109800.2	Wheat	plastid	75.26	71.73
Zm00001d053016_P002	Maize	cytosol, plastid	74.44	71.65
Zm00001d004812_P002	Maize	plastid	74.64	71.57
TraesCS4A01G206200.2	Wheat	golgi	75.05	71.54
EES09373	Sorghum	cytosol, plastid	75.26	71.46
Os11t0171500-01	Rice	plasma membrane	74.85	71.34
HORVU4Hr1G019530.1	Barley	plastid	75.26	71.32
TraesCS4D01G107200.1	Wheat	plastid	74.85	71.21
KRH34983	Soybean	cytosol	70.14	71.16
HORVU5Hr1G032550.3	Barley	cytosol	75.05	70.58
EES16732	Sorghum	cytosol	73.62	69.9
Os12t0169800-00	Rice	plasma membrane	74.64	69.39
TraesCS5B01G115400.1	Wheat	cytosol	75.05	69.38
TraesCS5D01G122800.1	Wheat	cytosol	74.85	69.19
Zm00001d023560_P002	Maize	cytosol	52.76	66.15
TraesCS5A01G107900.1	Wheat	cytosol	74.85	64.89
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	69.73	59.93
VIT_08s0032g00780.t01	Wine grape	cytosol	68.1	58.63
VIT_08s0032g01220.t01	Wine grape	cytosol	67.48	56.9
VIT_03s0038g03960.t01	Wine grape	cytosol	70.14	56.79
VIT_02s0025g00690.t01	Wine grape	cytosol	60.74	56.25
VIT_18s0001g00990.t01	Wine grape	plastid	58.69	54.88
VIT_06s0009g03150.t01	Wine grape	cytosol	59.92	54.87
VIT_10s0116g01800.t01	Wine grape	cytosol	57.67	54.86
VIT_19s0090g00410.t01	Wine grape	cytosol	58.69	53.54

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100262413	wikigene:100262413	MapMan:18.4.5.4	Gene3D:3.30.200.20
ProteinID:CCB44845	ProteinID:CCB44845.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	UniProt:F6GY07
EMBL:FN594968	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100262413	wikigene:LOC100262413	PFAM:PF00069	PFAM:PF13499	PIRSF:PIRSF000654	ScanProsite:PS00018
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF192
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CB4C6	ArrayExpress:VIT_18s0072g01030	EnsemblPlantsGene:VIT_18s0072g01030	EnsemblPlants:VIT_18s0072g01030.t01	RefSeq:XP_002271759
RefSeq:XP_002271759.2	RefSeq:XP_010665103.1	:	:	:	:

Description

No Description!

Coordinates

chr18:-:20502838..20524650

Molecular Weight (calculated)

55306.3 Da

IEP (calculated)

5.501

GRAVY (calculated)

-0.334

Length

489 amino acids

Sequence
(BLAST)

001: MRKEASKPRA VLPNATPRLR EEYQIGRKLG QGQYGITYLC THKSSGTHFA CKSIPKRKLV CKEDYDDVLR EIQIMHHLSE HPHVVQIKAT YEDSVFVHLV
101: MELCAGGELF DRIIQRGHYS ERQAAHLIKI IVGVVEACHS LGVMHRDLKP ENFLFESTDE DAKLKATDFG LSVFYKPGEV FFEVVGSPYY VAPEVLRKHY
201: GHEVDVWSAG VILYILLSGV PPFWAENDTG IFKEILKGKL DFKSDPWPSI SESAKDLIKK MLEMDPKKRI SAHEVLCHPW IVDDRVAPDK PLDSAVLSRL
301: KQFSAMNKLK KMALRVIAER LSEEEIGGLK ELFKMIDTDN SGTITFEELK EGLRKVGSEL MESEIKTLMD AADIDNSGTI DYGEFLAATL HLNKMEREEN
401: LIAAFSFFDK DGSGYITIDE LQQACREFGL GDAHLDEMIR EIDQDNDGRI DYGEFTAMMR KGDGGIGSRT MRNNLNFNLA DAFGINDTT

Best Arabidopsis Sequence Match ( AT4G09570.1 )
(BLAST)

001: MEKPNPRRPS NSVLPYETPR LRDHYLLGKK LGQGQFGTTY LCTEKSSSAN YACKSIPKRK LVCREDYEDV WREIQIMHHL SEHPNVVRIK GTYEDSVFVH
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K

Arabidopsis Description

CPK4Calcium-dependent protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38869]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.