Factsheet for VIT_08s0032g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_16s0050g01860.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	VIT_16s0050g01860.t01	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07688	Canola	cytosol	74.12	76.55
CDY14419	Canola	cytosol	74.12	76.55
Bra000105.1-P	Field mustard	cytosol	76.23	76.5
PGSC0003DMT400018575	Potato	cytosol	73.24	76.47
KRH32931	Soybean	plastid	79.93	76.3
PGSC0003DMT400054991	Potato	cytosol	78.17	76.29
Solyc01g006730.2.1	Tomato	cytosol	77.64	75.77
GSMUA_Achr9P25890_001	Banana	plastid	63.73	75.73
Solyc10g076900.1.1	Tomato	cytosol	66.73	75.65
AT2G38910.1	Thale cress	cytosol, plastid	77.46	75.47
Solyc10g081640.1.1	Tomato	cytosol	76.41	74.96
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	75.0	74.87
TraesCS2D01G249900.2	Wheat	cytosol, plastid	71.48	72.24
Zm00001d034376_P001	Maize	plastid	73.42	71.9
HORVU2Hr1G058530.2	Barley	cytosol, plastid	71.48	71.86
TraesCS2A01G248200.3	Wheat	cytosol, plastid	71.48	71.73
TraesCS2B01G269200.3	Wheat	cytosol, plastid	71.48	71.73
Os07t0161600-01	Rice	plasma membrane	71.13	71.13
EER90764	Sorghum	plastid	72.89	70.77
Zm00001d013105_P004	Maize	cytosol, plastid	72.36	70.38
EER98014	Sorghum	cytosol, plastid	70.95	69.36
VIT_08s0032g01220.t01	Wine grape	cytosol	70.42	68.97
VIT_18s0072g01030.t01	Wine grape	cytosol, mitochondrion	58.63	68.1
PGSC0003DMT400072292	Potato	cytosol, plastid	76.41	68.03
TraesCS5B01G428700.1	Wheat	cytosol	70.07	67.92
Zm00001d007912_P009	Maize	cytosol, plastid	70.95	67.5
TraesCS5A01G426800.2	Wheat	cytosol	70.95	66.07
VIT_07s0130g00130.t01	Wine grape	cytosol	57.75	66.0
TraesCS5D01G434800.2	Wheat	cytosol	70.6	65.74
Os03t0789000-00	Rice	cytosol, plasma membrane	67.78	65.36
VIT_03s0038g03960.t01	Wine grape	cytosol	62.5	58.77
VIT_02s0025g00690.t01	Wine grape	cytosol	51.41	55.3
VIT_06s0009g03150.t01	Wine grape	cytosol	51.76	55.06
VIT_18s0001g00990.t01	Wine grape	plastid	49.12	53.35
VIT_10s0116g01800.t01	Wine grape	cytosol	48.06	53.11
VIT_19s0090g00410.t01	Wine grape	cytosol	48.42	51.31

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100246254	wikigene:100246254	MapMan:18.4.5.4	Gene3D:3.30.200.20
ProteinID:CCB61553	ProteinID:CCB61553.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	UniProt:F6I3P3
EMBL:FN596742	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246254
wikigene:LOC100246254	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF81	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CA817
ArrayExpress:VIT_08s0032g00780	EnsemblPlantsGene:VIT_08s0032g00780	EnsemblPlants:VIT_08s0032g00780.t01	RefSeq:XP_002267735	RefSeq:XP_002267735.1	SEG:seg

Description

No Description!

Coordinates

chr8:+:4329875..4341071

Molecular Weight (calculated)

63025.2 Da

IEP (calculated)

4.937

GRAVY (calculated)

-0.329

Length

568 amino acids

Sequence
(BLAST)

001: MGNTCVGPNL AANGFLQSVS AAVWRTRPPE DMLPPPNADG SSSGDNAGSD GAKGSDPPMP VQSTPPETVK ITAEVQKAEK SDGNSGKQKK QTHMKRLSSA
101: GLQIDSVLQR NTENLKEIYS LGRKLGQGQF GTTYLCVEKA NGKEFACKSI AKRKLTTRED VEDVRREIQI MHHLAGHPNV ISIVGAFEDA VAVHVVMELC
201: VGGELFDRII QRGHYTERKA ADLARVIVGV VEACHSLGVM HRDLKPENFL FINQDEDSPL KTIDFGLSMF FRPGEIFTEV VGSPYYVAPE VLRKHYGPEC
301: DVWSAGVIIY ILLSGVPPFW DETEQGIFEQ VLKGDLDFVS EPWPSISDSA KDLVRKMLVR DPKKRLTAHE VLCHPWVQVN GVAPDKPLDS AVLTRLKQFS
401: AMNKLKKIAI RVIAESLSEE EIAGLKEMFK MIDVDNSGNI TLEELKTGLE RVGADLKDSE IIRLMQAADI DNSGTIDYGE FVAAMLHLNK IEKEDHLYAA
501: FSYFDKDGSG YITQDELQQA CEQFGLEAIH LEDVIREVDQ DNDGRIDYSE FVAMMQDRDF GKKGYKIT

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.