Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G269200.3 | Wheat | cytosol, plastid | 99.82 | 99.12 |
| TraesCS2A01G248200.3 | Wheat | cytosol, plastid | 99.64 | 98.94 |
| HORVU2Hr1G058530.2 | Barley | cytosol, plastid | 97.86 | 97.35 |
| Os07t0161600-01 | Rice | plasma membrane | 88.97 | 88.03 |
| EER98014 | Sorghum | cytosol, plastid | 87.72 | 84.85 |
| Zm00001d007912_P009 | Maize | cytosol, plastid | 87.37 | 82.24 |
| GSMUA_Achr9P25890_001 | Banana | plastid | 66.55 | 78.24 |
| TraesCS5D01G434800.2 | Wheat | cytosol | 77.94 | 71.8 |
| VIT_08s0032g00780.t01 | Wine grape | cytosol | 72.24 | 71.48 |
| PGSC0003DMT400018575 | Potato | cytosol | 66.19 | 68.38 |
| Solyc10g076900.1.1 | Tomato | cytosol | 59.43 | 66.67 |
| Bra000105.1-P | Field mustard | cytosol | 66.9 | 66.43 |
| CDY14419 | Canola | cytosol | 64.95 | 66.36 |
| CDY07688 | Canola | cytosol | 64.95 | 66.36 |
| PGSC0003DMT400054991 | Potato | cytosol | 68.51 | 66.15 |
| Solyc01g006730.2.1 | Tomato | cytosol | 68.51 | 66.15 |
| TraesCS4D01G107200.1 | Wheat | plastid | 60.5 | 66.15 |
| AT2G38910.1 | Thale cress | cytosol, plastid | 68.33 | 65.87 |
| KRH32931 | Soybean | plastid | 69.22 | 65.38 |
| TraesCS5D01G122800.1 | Wheat | cytosol | 60.85 | 64.65 |
| TraesCS5D01G434500.2 | Wheat | cytosol | 71.71 | 64.58 |
| Solyc10g081640.1.1 | Tomato | cytosol | 66.01 | 64.08 |
| TraesCS5D01G124000.1 | Wheat | plastid | 70.28 | 63.3 |
| TraesCS6D01G242000.2 | Wheat | mitochondrion | 60.68 | 62.23 |
| TraesCS1D01G433400.1 | Wheat | cytosol, golgi | 50.71 | 61.96 |
| TraesCS2D01G456400.1 | Wheat | cytosol, mitochondrion | 61.21 | 61.87 |
| TraesCS6D01G404800.1 | Wheat | cytosol | 58.72 | 58.82 |
| PGSC0003DMT400072292 | Potato | cytosol, plastid | 66.19 | 58.31 |
| TraesCS3D01G228700.1 | Wheat | cytosol, mitochondrion | 52.85 | 57.34 |
| TraesCS3D01G327700.3 | Wheat | plastid | 51.96 | 56.15 |
| TraesCS4D01G125500.1 | Wheat | cytosol | 51.96 | 54.89 |
| TraesCS1D01G308800.1 | Wheat | plastid | 50.36 | 54.74 |
| TraesCS4D01G318400.2 | Wheat | cytosol | 53.02 | 54.38 |
| TraesCS5D01G153800.1 | Wheat | cytosol | 51.07 | 53.05 |
| TraesCS2D01G229100.2 | Wheat | cytosol | 50.53 | 52.5 |
| TraesCS2D01G404200.1 | Wheat | cytosol | 49.47 | 52.06 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002048 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF13499 | ScanProsite:PS00018 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF183 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS2D01G249900 |
| EnsemblPlants:TraesCS2D01G249900.2 | TIGR:cd00051 | TIGR:cd05117 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2D:+:296848771..296852766
Molecular Weight (calculated)
61734.5 Da
IEP (calculated)
4.911
GRAVY (calculated)
-0.269
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNTCAGPSA TADRHGFFST VSVAVLWRPG AARAEPAVPP PDSCPSMCSS TSSAGPDLDD SDLSSPSSDP NKPKVKRVQS AGLIAESVLK RDSERIKDLY
101: TLGKKLGQGQ FGTTYKCVEK ATGKEFACKS IAKRKLVTEE DVEDVRREIQ IMHHLAGHPN VISIVGAYED AVAVHLVMEL CAGGELFDRI IQRGHYSEKA
201: AAQLARVIIG IVEACHSLGV MHRDLKPENF LFVNQKEDSP LKTIDFGLSI FFKPGGIYSD VVGSPYYVAP EVLLKQYGCE VDVWSAGVII YILLSGVPPF
301: WDESEQGIFE QVLQGDLDFS SEPWPSISKS AKDLVRKMLN RDPGKRLTAH EALCHPWVCV DGVAPDKPLD SAVLTRLKQF SAMNKLKKMA LRVIAENLSE
401: DEIAGLREMF KMLDTDNSGQ ITLEELKTGL QRVGANLKES EIATLMEAAD IDNSGSIDYG EFLAATLHLN KVEREDNLFA AFSYFDKDGS GYITQDELQK
501: ACEEFGIGDA HLDDIIRDID QDNDGRIDYN EFVTMMQKGN NPLGKKGQGQ MSFGLREALK IR
101: TLGKKLGQGQ FGTTYKCVEK ATGKEFACKS IAKRKLVTEE DVEDVRREIQ IMHHLAGHPN VISIVGAYED AVAVHLVMEL CAGGELFDRI IQRGHYSEKA
201: AAQLARVIIG IVEACHSLGV MHRDLKPENF LFVNQKEDSP LKTIDFGLSI FFKPGGIYSD VVGSPYYVAP EVLLKQYGCE VDVWSAGVII YILLSGVPPF
301: WDESEQGIFE QVLQGDLDFS SEPWPSISKS AKDLVRKMLN RDPGKRLTAH EALCHPWVCV DGVAPDKPLD SAVLTRLKQF SAMNKLKKMA LRVIAENLSE
401: DEIAGLREMF KMLDTDNSGQ ITLEELKTGL QRVGANLKES EIATLMEAAD IDNSGSIDYG EFLAATLHLN KVEREDNLFA AFSYFDKDGS GYITQDELQK
501: ACEEFGIGDA HLDDIIRDID QDNDGRIDYN EFVTMMQKGN NPLGKKGQGQ MSFGLREALK IR
001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS
Arabidopsis Description
CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.