Factsheet for TraesCS3D01G017800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G005540.1	Barley	golgi, plasma membrane	56.64	90.11
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	80.34	89.85
TraesCS3B01G018300.1	Wheat	mitochondrion	80.34	87.39
TraesCS1D01G432800.1	Wheat	plasma membrane	69.08	70.86
TraesCS1D01G433200.1	Wheat	plasma membrane	71.76	69.21
TraesCS1D01G432900.1	Wheat	plasma membrane	71.76	68.76
TraesCS1D01G433100.1	Wheat	plasma membrane	65.38	66.27
TraesCS1D01G432700.1	Wheat	cytosol, peroxisome, plasma membrane	65.55	64.68
TraesCS1D01G432500.1	Wheat	plasma membrane	65.04	63.13
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	54.12	62.04
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	53.45	61.63
Zm00001d009705_P001	Maize	plasma membrane	58.99	61.47
OQU77336	Sorghum	cytosol	53.28	60.27
Zm00001d039150_P001	Maize	plasma membrane	59.5	58.8
CDX84361	Canola	plasma membrane	38.32	58.46
EES20021	Sorghum	plastid	60.17	57.56
KXG22628	Sorghum	plastid	60.34	55.92
GSMUA_Achr9P05400_001	Banana	plastid	41.51	55.38
Bra040840.1-P	Field mustard	plastid	44.03	52.72
CDY29871	Canola	plastid	44.03	52.72
CDX92855	Canola	plastid	44.03	52.61
TraesCS3D01G228400.1	Wheat	cytosol, nucleus, plasma membrane	55.46	52.55
AT4G27970.6	Thale cress	plastid	44.37	50.87
KRH38307	Soybean	golgi, plasma membrane, plastid	35.29	50.72
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	42.35	50.2
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	49.58	49.33
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	41.68	48.72
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	44.71	47.93
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	45.71	46.66
KRH08776	Soybean	cytosol, nucleus, plasma membrane	46.55	46.4
KRH38311	Soybean	cytosol, nucleus, plasma membrane	46.39	46.23
KRH08775	Soybean	cytosol, nucleus, plasma membrane	45.04	45.89
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	48.24	45.77
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	45.88	45.27
PGSC0003DMT400074359	Potato	plasma membrane	45.38	45.15
Bra026471.1-P	Field mustard	cytosol, plastid	42.18	45.06
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	46.05	44.48
Solyc09g014610.2.1	Tomato	plasma membrane	44.37	44.44
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.05	44.41
KRH35219	Soybean	cytosol	41.85	44.38
TraesCS1D01G126500.1	Wheat	cytosol, peroxisome, plasma membrane	44.87	44.21
CDX87147	Canola	cytosol, nucleus, plasma membrane	42.86	40.93
CDY19015	Canola	plastid	43.7	40.82
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	43.53	40.79
Bra026294.1-P	Field mustard	plastid	43.36	40.44
Bra009724.1-P	Field mustard	cytosol	43.19	40.41
CDX89215	Canola	plastid	43.19	40.35
CDX80404	Canola	cytosol	43.03	40.25
Bra029390.1-P	Field mustard	cytosol	43.03	40.0
Bra010388.1-P	Field mustard	plastid	43.36	39.81
CDY14262	Canola	plastid	43.03	39.51
CDY46973	Canola	cytosol	40.0	38.51
CDY44267	Canola	cytosol	39.66	38.44
TraesCS3D01G174800.1	Wheat	plasma membrane	25.04	38.3
TraesCS2D01G395700.1	Wheat	plastid	37.14	37.78
CDX88065	Canola	cytosol	43.36	34.63

Protein Annotations

EnsemblPlants:TraesCS3D01G017800.1	EnsemblPlantsGene:TraesCS3D01G017800	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:6021976..6023847

Molecular Weight (calculated)

66201.8 Da

IEP (calculated)

9.154

GRAVY (calculated)

0.268

Length

595 amino acids

Sequence
(BLAST)

001: MISLARHLPR SISRACILHE LAGIIIIFES NIVATFRSLS RFMVPMEKVH VRMDGEPGCA LPPEADAFLA DVGAGTTIET PFSVSLSVPA SPSRETKLDV
101: HHPAVPLRQA RQHSLPSPAV RGSAEVPAVP RSNTVRKRDR RFDRLRTFSG RLDRQLSTLR GLSHELQAAD LERGSAKISE EDTDDDHDVP TAGRYFDALE
201: GAELDTLRST EVAVLPKDEL WPFLLRFPIS AFGMCLGVNS QAMLWKTLES EPSMAFLHVC PAANHVLWWI SVALTAVVSI VYLLKVVFYF EAIRREFHHP
301: VRVNFFFAPW VACLFLVKGV PRPEWEIHHL FWYFLMVPIL CLDLKIYGQW MSSGERRLSK VANPSNHLAV VGNFVGALLG ARMGLRELPI FFFAVGLAHY
401: AVLFVTLYQR LPTNKKLPKE LHPVFFLFVA APSVASMAWA RISGEFNNGA KLLYFLSLFL YVSLVVRVNL FRGLRFSLAW WAYTFPMTSV ALATVLYASE
501: VNNMLTLTLA VGLSGIAVLT VIGVLATTVY HAFVCGDLFP NDVSIAIKQK RPKFSNILAH LRLPTPASSS SSANSRTTSS IGESPVIYGH ERAEC

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.