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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:
  • plastid 3
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84361 Canola plasma membrane 76.29 98.21
CDY29871 Canola plastid 83.27 84.1
CDX92855 Canola plastid 83.27 83.94
AT4G27970.6 Thale cress plastid 82.87 80.15
CDY14262 Canola plastid 93.03 72.07
CDX89215 Canola plastid 83.07 65.46
CDY19015 Canola plastid 82.67 65.15
Zm00001d010430_P001 Maize plasma membrane 41.43 63.61
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 48.21 60.2
TraesCSU01G204200.1 Wheat plasma membrane 29.88 56.82
TraesCS1B01G388600.1 Wheat plasma membrane 41.83 56.3
GSMUA_Achr9P05400_001 Banana plastid 47.81 53.81
TraesCS1A01G423900.1 Wheat plasma membrane 50.0 49.8
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 48.41 47.74
TraesCS1B01G455100.1 Wheat plasma membrane 50.2 47.01
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 50.4 46.85
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 49.4 46.62
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 54.98 46.15
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 47.61 46.05
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 47.81 45.63
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 46.81 45.54
OQU77336 Sorghum cytosol 47.61 45.44
CDX87147 Canola cytosol, nucleus, plasma membrane 56.18 45.26
TraesCS1D01G432800.1 Wheat plasma membrane 51.99 45.0
TraesCS3B01G018300.1 Wheat mitochondrion 48.61 44.61
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 55.18 44.53
CDX80404 Canola cytosol 56.37 44.5
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 55.38 44.48
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 55.58 44.43
TraesCS1D01G433100.1 Wheat plasma membrane 51.59 44.12
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 52.99 44.04
TraesCS1D01G433200.1 Wheat plasma membrane 53.98 43.92
Zm00001d009705_P001 Maize plasma membrane 49.8 43.78
TraesCSU01G001600.1 Wheat plasma membrane 53.19 43.77
TraesCS1A01G424500.1 Wheat plasma membrane 51.79 43.55
GSMUA_Achr7P14260_001 Banana cytosol 51.59 43.46
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 52.19 43.45
TraesCS1B01G456400.1 Wheat plasma membrane 51.99 43.36
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 53.39 43.3
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 51.79 43.19
TraesCS1B01G456500.1 Wheat plasma membrane 51.79 43.19
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 49.2 43.18
TraesCS1B01G456200.1 Wheat plasma membrane 53.98 43.15
TraesCS1B01G456300.1 Wheat plasma membrane 53.19 43.13
Zm00001d037816_P001 Maize plasma membrane 54.38 42.92
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 53.98 42.74
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 51.59 42.74
Zm00001d044181_P001 Maize plasma membrane 53.59 42.7
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 53.39 42.68
Zm00001d041653_P001 Maize plastid 51.0 42.67
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 50.8 42.64
TraesCS1D01G432900.1 Wheat plasma membrane 52.59 42.51
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 50.2 42.35
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 50.4 41.96
TraesCSU01G001400.1 Wheat plasma membrane, plastid 52.39 41.88
TraesCS1B01G147400.1 Wheat plasma membrane 52.79 41.73
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 51.39 41.35
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 54.18 41.34
CDY44267 Canola cytosol 50.4 41.21
TraesCS1D01G432500.1 Wheat plasma membrane 50.2 41.11
Zm00001d039150_P001 Maize plasma membrane 49.0 40.86
CDY46973 Canola cytosol 50.0 40.61
EES20021 Sorghum plastid 50.2 40.51
TraesCS1A01G127500.1 Wheat plasma membrane 52.59 40.43
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 51.79 40.37
TraesCSU01G001500.1 Wheat plasma membrane 53.98 40.27
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 52.19 39.94
CDX98059 Canola cytosol, peroxisome, plastid 44.02 39.82
TraesCS3A01G225100.1 Wheat plasma membrane 53.59 39.5
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 15.14 39.38
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 45.22 39.27
KXG22628 Sorghum plastid 49.8 38.94
CDX88065 Canola cytosol 56.37 37.99
CDY30084 Canola plasma membrane 44.02 37.71
CDY19522 Canola endoplasmic reticulum 14.94 37.69
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 14.94 36.95
Zm00001d039314_P001 Maize plasma membrane 51.99 35.27
OQU87187 Sorghum plasma membrane 53.98 33.66
KXG31512 Sorghum plasma membrane 52.59 33.0
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 24.9 32.3
CDY12936 Canola plasma membrane 24.5 32.28
CDY03280 Canola plasma membrane 25.1 32.14
CDY08628 Canola golgi, peroxisome, plasma membrane 24.5 31.78
CDY24881 Canola extracellular 12.15 31.77
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 4.98 30.49
CDY19523 Canola cytosol, extracellular, plasma membrane 6.18 24.41
CDY12934 Canola cytosol, extracellular, plasma membrane 6.57 24.09
CDY08625 Canola plasma membrane 9.16 22.89
CDX97407 Canola cytosol 1.99 6.76
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078EDH9EnsemblPlants:CDX97408ProteinID:CDX97408ProteinID:CDX97408.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0006810GO:GO:0006873
GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0019725
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00104543001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF2
InterPro:SLAC/SLAHTMHMM:TMhelixUniParc:UPI0004EEF4D5InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
BnaC08g12730D
Coordinates
chrLK031899:-:439751..442223
Molecular Weight (calculated)
56377.1 Da
IEP (calculated)
10.025
GRAVY (calculated)
0.251
Length
502 amino acids
Sequence
(BLAST)
001: MNNPRSVNSS ASPANLDLVE NQRQSSSGEF SRIEKRNGAT KITFHSKSMP RGCNDKKYDL FRTMSGKLER QISNLRGKPI DTSLQDKEIT ESLTAERFLE
101: ALQGPELETL KEMEKIVLPE DKTWPFLLRF PVTSFGMCLG VSSQAIMWKT LATTKAEKFL HLTQVVNHVL WWISLVLLVS FSITYLFKTI FFFEAVRREF
201: KHPIRVNFFF APLISVLFLA LGIPHSITSS LPSILWYFFI APILLLEMKI YGQWMSGGQR RLSKVANPTN HLSIVGNFAG ALLGASLGLK EGPMFFFSVG
301: LAYYLVLFVT LYQRLPTNET LPKELHPVFF LFVAAPAVAS MAWTTISASF DIGSRIAYFI SLFLYFSLVV RINFFRGFKF SLAWWAYTFP MTAVATATIK
401: YSGEVNGLAT QILAVLMSGA ATLTVIGVLV LTVVHAFVKR DLFPNDFAIA ISAEQPKQKK WLKQLINGSL ENSTRGLKVL DPEDTRIDIE APPLSNAVCH
501: TV
Best Arabidopsis Sequence Match ( AT4G27970.6 )
(BLAST)
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.