CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 3
extracellular 3
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19523	Canola	cytosol, extracellular, plasma membrane	60.98	39.37
CDY08625	Canola	plasma membrane	93.9	38.31
CDY12934	Canola	cytosol, extracellular, plasma membrane	63.41	37.96
AT1G62262.1	Thale cress	plasma membrane	81.71	18.36
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	74.39	15.76
CDY12936	Canola	plasma membrane	73.17	15.75
CDY03280	Canola	plasma membrane	73.17	15.31
CDY08628	Canola	golgi, peroxisome, plasma membrane	69.51	14.73
KRH25357	Soybean	plasma membrane	51.22	14.05
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	56.1	12.89
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	46.34	12.14
GSMUA_Achr9P21990_001	Banana	plasma membrane	54.88	11.9
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	48.78	11.83
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	54.88	11.81
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	54.88	11.66
KRH51762	Soybean	mitochondrion	43.9	11.46
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	51.22	11.26
Os01t0247700-01	Rice	extracellular, plasma membrane	46.34	10.95
KRH51125	Soybean	plasma membrane	50.0	10.93
KRH61084	Soybean	golgi, peroxisome, plasma membrane	51.22	10.85
KRH56158	Soybean	golgi, peroxisome, plasma membrane	48.78	10.81
KRH02037	Soybean	plasma membrane	48.78	10.72
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	48.78	10.42
Os05t0269200-00	Rice	cytosol, golgi, plasma membrane	48.78	10.03
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	46.34	9.77
TraesCS3D01G174800.1	Wheat	plasma membrane	45.12	9.51
TraesCS3B01G199200.1	Wheat	plasma membrane	45.12	9.46
HORVU3Hr1G033800.1	Barley	plastid	45.12	9.37
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	45.12	9.3
TraesCS3A01G167000.1	Wheat	plasma membrane	45.12	9.18
EER99979	Sorghum	plastid	46.34	9.05
GSMUA_Achr10P...	Banana	endoplasmic reticulum	39.02	8.86
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	28.05	8.42
HORVU2Hr1G118150.1	Barley	peroxisome	24.39	6.69
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	26.83	6.67
CDX84361	Canola	plasma membrane	29.27	6.15
CDX98059	Canola	cytosol, peroxisome, plastid	37.8	5.59
CDY30084	Canola	plasma membrane	37.8	5.29
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	30.49	4.98
CDY29871	Canola	plastid	25.61	4.23
CDX92855	Canola	plastid	25.61	4.22
CDY14262	Canola	plastid	29.27	3.7
CDY44267	Canola	cytosol	26.83	3.58
CDY46973	Canola	cytosol	26.83	3.56
CDY19015	Canola	plastid	26.83	3.45
CDX89215	Canola	plastid	26.83	3.45
CDX87147	Canola	cytosol, nucleus, plasma membrane	25.61	3.37
CDX80404	Canola	cytosol	25.61	3.3
CDX88065	Canola	cytosol	25.61	2.82
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	0.0	0.0
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	0.0	0.0
CDX97407	Canola	cytosol	0.0	0.0
CDY19522	Canola	endoplasmic reticulum	0.0	0.0
CDY24881	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.50.10.150	MapMan:35.1	GO:A0A078EML4	EnsemblPlants:CDY00628	ProteinID:CDY00628	ProteinID:CDY00628.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873
GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00110433001	InterPro:IPR038665	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF7
InterPro:SLAC/SLAH	TMHMM:TMhelix	UniParc:UPI0004EF2600	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	:

Description

BnaC04g22970D

Coordinates

chrLK031920:-:1004808..1005162

Molecular Weight (calculated)

9714.1 Da

IEP (calculated)

8.330

GRAVY (calculated)

0.791

Length

82 amino acids

Sequence
(BLAST)

1: MSILSSFHAG YFRISLSLCS QALLWKIMVH LHNHLPSMAF YLMWYIALAI QVSLCFLYAF KCIFYFDLVK EEHYSGCLFF RS

Best Arabidopsis Sequence Match ( AT1G62262.1 )
(BLAST)

001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK

Arabidopsis Description

SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.