CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	83.57	90.23
TraesCS3B01G199200.1	Wheat	plasma membrane	70.48	75.7
TraesCS3D01G174800.1	Wheat	plasma membrane	69.29	74.81
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	59.52	73.96
HORVU3Hr1G033800.1	Barley	plastid	69.52	73.92
TraesCS3A01G167000.1	Wheat	plasma membrane	69.29	72.21
Os01t0247700-01	Rice	extracellular, plasma membrane	58.33	70.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.9	66.2
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	57.14	62.99
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	56.67	61.98
GSMUA_Achr9P21990_001	Banana	plasma membrane	55.71	61.9
KRH51762	Soybean	mitochondrion	44.05	58.92
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	37.62	57.88
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	49.05	57.7
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	52.14	56.74
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.71	55.96
CDY19522	Canola	endoplasmic reticulum	26.19	55.28
KRH61084	Soybean	golgi, peroxisome, plasma membrane	50.71	55.04
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	40.24	53.99
KRH56158	Soybean	golgi, peroxisome, plasma membrane	47.38	53.78
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	25.95	53.69
KRH25357	Soybean	plasma membrane	37.14	52.17
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	30.24	52.05
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.95	51.74
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	47.86	50.5
HORVU2Hr1G118150.1	Barley	peroxisome	35.48	49.83
CDY12936	Canola	plasma membrane	45.0	49.61
AT1G62262.1	Thale cress	plasma membrane	43.1	49.59
Bra027058.1-P	Field mustard	plasma membrane	44.76	49.34
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	38.33	48.79
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	44.76	48.58
AT1G62280.1	Thale cress	plasma membrane	43.57	47.53
CDY08628	Canola	golgi, peroxisome, plasma membrane	43.57	47.29
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	20.48	46.49
CDY03280	Canola	plasma membrane	43.33	46.43
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.05	46.34
KRH02037	Soybean	plasma membrane	40.95	46.11
KRH51125	Soybean	plasma membrane	40.95	45.87
Bra034474.1-P	Field mustard	peroxisome	23.1	44.5
CDY24881	Canola	extracellular	20.24	44.27
CDY12934	Canola	cytosol, extracellular, plasma membrane	11.19	34.31
CDY19523	Canola	cytosol, extracellular, plasma membrane	10.24	33.86
CDY08625	Canola	plasma membrane	15.0	31.34
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	33.1	26.94
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	33.57	26.81
OQU77336	Sorghum	cytosol	33.57	26.81
EES20021	Sorghum	plastid	34.76	23.47
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	33.81	22.61
KXG22628	Sorghum	plastid	34.29	22.43
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	34.05	22.2
OQU82188	Sorghum	plastid	34.05	21.9
OQU87187	Sorghum	plasma membrane	35.24	18.39
KXG31512	Sorghum	plasma membrane	34.52	18.12
CDX97407	Canola	cytosol	0.48	1.35

Protein Annotations

Gene3D:1.50.10.150	MapMan:24.3.10	UniProt:C5XJG5	EnsemblPlants:EER99979	ProteinID:EER99979	ProteinID:EER99979.2
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006873
GO:GO:0008150	GO:GO:0008308	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725
GO:GO:0055085	InterPro:IPR038665	PFAM:PF03595	PANTHER:PTHR31269	PANTHER:PTHR31269:SF4	EnsemblPlantsGene:SORBI_3003G000400
TMHMM:TMhelix	UniParc:UPI00081ABAA6	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:57843..60197

Molecular Weight (calculated)

46018.2 Da

IEP (calculated)

9.992

GRAVY (calculated)

0.489

Length

420 amino acids

Sequence
(BLAST)

001: MELVASPSSS SSPSLKPHDD DDGGSSKSNN NTASSKKQAT SSSSKCPPHG GGNLFRRWGW EWEWDMLTRF HAGYFRISLA LSGQALLWRT LISDSAAAAS
101: ASSGHHGPLL LPLLPSVAFL LLWSLALLAL LALAALYAVR CLLRFPAVRA EFRHHVAMNY LFAPWISCLL LLQSAPFLFL RPSAPPYHLL WWAFSLPILA
201: LDVKIYGQWF TRGRKFLSMV ANPASHITVI GNLVTARAAA SMGWHEAAVA IFAVGAAHYL VLFVTLYQRF LGSDSLPAML RPVFFLFFAA PSMASLAWDA
301: ISASFDTCCK MLFFLSLFLF ASIVSRPTLF KRAMRRFSVA WWAYSFPLTL LALASAEYAR EVRQAAANAL MLALAVLSVA VTLALMLFTA LRTADLLPRD
401: DPFDCPQLPP PAARSSILAS

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.